Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0752 ATGGAAGGAGAAAGAGGTGTTAATCCCAGCTATGATCTTCAAGTTTCATTCACCAACACCCCTCAAGCGATCCATGAAATGGGGTTTGTCCAATTTGAAGAAAATCAGGTTCTTAGCTTCTTGGCACCCTCAGCTCAATCCCAATCTTCTCAGCTCTCACAGTCTCTAACCGTCACCGCCGCCACAGTCACCACCACCATCGCTACCACTACTACTTCTGGATCAGTTGGTTTTAACCATAATGACCTTGCATCCAGAAGTTCTTGGAACAATGAACAGGTGAGAACACTGGATCCTAAAGCTGTCAATGATGAAAATTGCACCGGAAATACCAGTGATGGCAACAACACATGGTGGAGAAGTTCAGGGTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTTCAGACAAGAAGTGATGTGGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGACAGAAAGTTGTGAAGAATAGCCTTCATCCAAGAAGTTACTACCGTTGTACCCATAACAACTGTAGAGTGAAGAAAAGGGTTGAAAGACTATCAGAAGATTGTCGAATGGTAATAACAACCTACGAAGGAAGACACAATCATTCTCCCTGTGATGACTCAAATTCATCAGAACATGAATGTTTCACTTCTTTTTGA 678 0.4263 MEGERGVNPSYDLQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSSQLSQSLTVTAATVTTTIATTTTSGSVGFNHNDLASRSSWNNEQVRTLDPKAVNDENCTGNTSDGNNTWWRSSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0752 225 SUPERFAMILY WRKY DNA-binding domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra9g0752 225 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 223 IPR044810 GO:0003700
Vra9g0752 225 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0752 225 ProSiteProfiles WRKY domain profile. 146 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0752 225 MobiDBLite consensus disorder prediction 101 122 - -
Vra9g0752 225 Gene3D WRKY domain 138 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra9g0752 225 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 223 - -
Vra9g0752 225 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0752 Vra-Chr9 8590114 8595313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0752 3 225 WRKY Transcription Factor Family AT2G44745 57.576 1.40e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra9g0752 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0752 - - var:108347245 417.157