Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0742 ATGGTCTACACAGGATTCTTTCCCAAAAAGAGGCGGGAAACTTGGTCCAAACACAAAACCCCCAATCAAAGAATCCAAAACACTCTTTTCTTTACTTCTCTTCCCGCTTCTCTCTCCCTTTCTCCCTCCAAACCAAACCTTGTTGCACCACATTGCATTGCAAACACGGAGAGATCCGAATCTGGATCCATGGCTGAGTGCGAATTCGAACTCGATCTCGAAGAGAAATCATGGCATCTCTTTGCAGTCCTTCTGCGAATTGGCCACGCAGTCTATCCGTCACGCCTCGCCTCAGAGTGTCGTTTATTTGCTGCCTCGCCGGACTTTGTCTGCTACGTCAGTTCTCTCTCTGGTTCACCACTCTCTGTCACTGACAATGGACTCGTCACGCCCTCTTTTAGTGCGGTTTTTGCACTTGGAAGCTTCTTCTCTGTCCGTCTCTCCCCTGAACCGCAAACGCACCGTTTTAGGAAACGCAAGTTGCTATTAGACTCGGCGGAAGCAGATGGAATAGAACATAAAAGGTTAGCAATTGGAAATGGAATTCGGGAAATATCGTTCCAGAGTTTTGCTGATGCTACAAAGACTCTGAAGAGAAGAAACTTCCCTATATTAAAATTTGAATCACAGAATATAGGTAGTGGGAATTTTGTATTCCCCTTGCCGGTTGATAAAATTGAAAAATGTTCAGGTTGTCTAATGCCAAATTTTAAACATAGGCATGGTGTCAGCCCAACCATGTCTAGTGAAGAGGTTTCTAAATCAATTATCAAAGACTTAAACCGTCCAAAGCTAGTTGACGTAAATAGATTCATGGCATGTAATCTCCGTGTTGATCTTGCCATGTTAGAACCCTCAATATGCAAGAACGGCATTGATGTTAAAAGCTTTGGATTTGGAATGAAAATGGATTGTTTTGATGCATTTGGCAGAACTGAACTAAATAGTATTAATCATGTGGCAAGTGGTACGGGTGAAAGTAATGTATGCAAAAATCAACCAGGAAGACCTAATGAAGATGATGAGGTGCGAAATGGTTCAAAGAAGGAGCTTATTGATACTAGTTCAAATAGAGACAAGGAAGATATTACTCAGATGGTCAATGCTGCACTCTGTGGAGAAGAATTAACTAATGGTTTGCAACAAAAGAACCCATGCCTTGCAATAAATTTGGAAATAATGGAGGGTGAGAGAAACATAATAACTTATAAAAGAGCTAATTCCTCTTTAAATCCCAAGCGGTCTTTGAAATCTTCTAGCACATTAAAGGGGGGGCAGAAGAACGGTATAAATCCCAAGTCACAGATTCTTAAAGAGTCACCAGCCAGTAACAAATGTAATAATGTTCCACAAAATGTTGATCAATTTAAAAATGATCAGAAACTTACAACGAGGAAGCAAAGTCATAAAGAGAACAAGGCAGAAAATATTCCTGCCACTACTAAGGTGGAGAAAAAAGCATATCCATCCTTTGAAGCTTTTATAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGCAATGCTCATAAAAATCACATAACTACTGAACGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTTCATAATAAGATATGAAGGTTCTGTAAAAAATGACAACACGGAATGCTTTGTTTTAGAGCATGTTGAGCATGAGAGACCTGAGGTTTTGAAAAAAGAAATTGATTTATTCCAGATTCAATGGTACGGTTATTGCCTGTTCAGGGCCCTTTATTGTTTGCACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCAAAGCAGAGGTTACCTTATTGATTTCAACCTAGCCATGGATTTGAAGCAGAAGAACAAAGTTGGAAGTAAATCAAAACCTAACCTGGTTGCATCATCCCATAATGTTTCTCTTTCTTCTCGTTCTGCTCCTTTGGTCCGAGGCAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCTTTGGCGGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAACAAAAGGCTTTTACTGGTCTTCAGAAAAATGGTCCCGACATGATTGGTGGGAGTTTTCCTAGAGCACAAGGAACAGACGGCTCGGGTATAACTTCTGCTAGAGATGCTAGCACTAGGACTGCTTCTGCAGAGAGGCGCAGAGAACCTTTACCTTCCTATGGAAGAAAGGAACTTATCAGCTTTGTTAATACTATGAAATGTACAAACAACAGTTCAACAATAGGTCCTTCTTCTCAAAGGAAAAGGATTACTGCTCCCTCAAGTAGAGTAGATGGCAAGATTTTTCATATTACCCCAATGCCTCTGCATTCATCTACCGCTGGTGCTGTATTATTGAGAAGCAAAGGAGATGGAAAACAGAAAAAAGAAGGTCCGTGTGTTGGAACCAAAGGATTCCGTGCACCGGAGGTTTTGTTAAGATCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGCGTCACTCTACTCTACATGGTGATAGGGAAAACTCCTTTCACTGGCGATCCGGAACAAAACATAAAAGAAATTGTAAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAAGTGTCTTTTCCAGTGGAGTTACTTGACCAGCGATACTTGCAGTCATGGGACTTGGAAGCCTGGTGCAAAACTCACACAAAGAGACCAGAATTTCTTGAACAGATCCCGAAATCGTTGTTTGATTTGATAGGCAAGTGTCTAACAGTTAATCCAAGAAATAGACTTAGTGCTGAAGATGTTCTTAGACATCAATTCTTTGACTCACTAAACGACTCTTTGAGGAAGCAAAGGATGATACAACGTGCTATCAGATCAGAGGCTGCAGCAGCTTCTGCTGCAATCTGA 2973 0.4107 MVYTGFFPKKRRETWSKHKTPNQRIQNTLFFTSLPASLSLSPSKPNLVAPHCIANTERSESGSMAECEFELDLEEKSWHLFAVLLRIGHAVYPSRLASECRLFAASPDFVCYVSSLSGSPLSVTDNGLVTPSFSAVFALGSFFSVRLSPEPQTHRFRKRKLLLDSAEADGIEHKRLAIGNGIREISFQSFADATKTLKRRNFPILKFESQNIGSGNFVFPLPVDKIEKCSGCLMPNFKHRHGVSPTMSSEEVSKSIIKDLNRPKLVDVNRFMACNLRVDLAMLEPSICKNGIDVKSFGFGMKMDCFDAFGRTELNSINHVASGTGESNVCKNQPGRPNEDDEVRNGSKKELIDTSSNRDKEDITQMVNAALCGEELTNGLQQKNPCLAINLEIMEGERNIITYKRANSSLNPKRSLKSSSTLKGGQKNGINPKSQILKESPASNKCNNVPQNVDQFKNDQKLTTRKQSHKENKAENIPATTKVEKKAYPSFEAFIIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHITTERNMLERFGGKNFIIRYEGSVKNDNTECFVLEHVEHERPEVLKKEIDLFQIQWYGYCLFRALYCLHKEGVVHRDVKPGNFLFSRKQSRGYLIDFNLAMDLKQKNKVGSKSKPNLVASSHNVSLSSRSAPLVRGKNLGGSKSLTSNKRALADYKNYSELNRHVKQKAFTGLQKNGPDMIGGSFPRAQGTDGSGITSARDASTRTASAERRREPLPSYGRKELISFVNTMKCTNNSSTIGPSSQRKRITAPSSRVDGKIFHITPMPLHSSTAGAVLLRSKGDGKQKKEGPCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDREVSFPVELLDQRYLQSWDLEAWCKTHTKRPEFLEQIPKSLFDLIGKCLTVNPRNRLSAEDVLRHQFFDSLNDSLRKQRMIQRAIRSEAAAASAAI* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0742 990 MobiDBLite consensus disorder prediction 323 360 - -
Vra9g0742 990 MobiDBLite consensus disorder prediction 707 747 - -
Vra9g0742 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Vra9g0742 990 Gene3D Transferase(Phosphotransferase) domain 1 455 654 - -
Vra9g0742 990 MobiDBLite consensus disorder prediction 335 360 - -
Vra9g0742 990 Pfam Protein kinase domain 825 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0742 990 Pfam Protein kinase domain 498 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0742 990 ProSiteProfiles Protein kinase domain profile. 494 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0742 990 PANTHER CASEIN KINASE-RELATED 460 973 - -
Vra9g0742 990 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 460 973 - -
Vra9g0742 990 SUPERFAMILY Protein kinase-like (PK-like) 493 975 IPR011009 -
Vra9g0742 990 MobiDBLite consensus disorder prediction 723 737 - -
Vra9g0742 990 MobiDBLite consensus disorder prediction 410 435 - -
Vra9g0742 990 SMART serkin_6 494 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0742 990 Gene3D Transferase(Phosphotransferase) domain 1 803 988 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0742 Vra-Chr9 8505930 8513705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0742 826 968 Core Cell Cycle Gene Families AT2G38620 33.775 2.36e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Vra9g0742 Pkinase 1.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0742 K02214 - gmx:100783107 1358.58