Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0702 ATGGCTCAAGCAATGGCATCAATGGCAGGTAGCCTTCAACTCAGTGGCTCCACACGTTTGCATGCCAAAAGGGTGTCTTCAGTCACACGTGCAGGCTTCACAGTTAGAGCACAACATCAACAAGAACAAGTGAGTGTGAACTTCCCTTGCGCTGTACAAGGAACTATATTTTCTCAGAGGAAACAATTATCTGATGGATGCACAAACCAAAATTCAAAGGATTATTACCTAATGCAGGATAGTTCCATGTTGCGTTCTGAAAAATCATTGAGGAGAACACTCTTTCTTTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTATTCTTATGCAAAGACAAAGAGTAAGAATCCTTATGATGAAAAACGATTGCTACAACAAAATCAGCGGATACAGAAGGAAAACAATGCGCCAGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAATAGTATCTTCAGAGAACTATTTAAAGAGTAACTCGGGACTCATATACAGGGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGTTATAATGAATCTGGTCGTCGAATTGACAGCACTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAGGGAATCAGGGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTGGAGCTATTAAGCGTGCAAAATTGTGAAAGGAGGACCGTAGCCTTTTACTCAGATGTAATTTGCAATTGA 861 0.4146 MAQAMASMAGSLQLSGSTRLHAKRVSSVTRAGFTVRAQHQQEQVSVNFPCAVQGTIFSQRKQLSDGCTNQNSKDYYLMQDSSMLRSEKSLRRTLFLSVLVSTGFFPTLYSYAKTKSKNPYDEKRLLQQNQRIQKENNAPEDFPNFIREGFEVKIVSSENYLKSNSGLIYRDFVVGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGTPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTVAFYSDVICN* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0702 286 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 180 266 IPR001179 GO:0003755
Vra9g0702 286 Gene3D - 123 278 IPR046357 GO:0003755
Vra9g0702 286 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 183 270 IPR001179 GO:0003755
Vra9g0702 286 SUPERFAMILY FKBP-like 112 270 - -
Vra9g0702 286 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 34 286 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0702 Vra-Chr9 7965321 7970099 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0702 176 272 Calmodulin-binding Proteins AT5G48570 33.333 3.11e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0702 - - var:108347486 556.214