Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0681 ATGGGATGGTTAAGATCGTATCTGCCAGTAATGGGTATGGTGTTGAATCAGATCATTTATGCAGGAGTTAGTCTCAGCACAAGTCTTGTTTACTCAGCAGGAATGAGTCCAAGGGTCTTTGTGGTTTATCGCCATGTTCTTGCAACCATTGTAATTGCTCCAATAGCTTATTTCTCACGGAGAAATTCTGGCTCCTATTACTTAAACTTGAAGAGTTTCTCATGGATATTCTTGATCTCCTTCATAGGCATTGTGTTGAATCAAAATTTCTTTTCCGAGGGTTTATACCTGACAAATTCTTCGGTGGCAAGTGCATTTGTGAATCTTGTTCCAGCAGTAACATTTGTGATAGCATCTTGTGCAGGAATGGAGAAAGTGAACATTCGAAGCTGGCGAACTATAGCGAAGATAGTAGGAACAGTGATATGTGTGAGTGGAGCAATGTCCATAGCTTTGTTAAAGGGTCCAAAGCTTCTAAATGCAGAAAACCTGCCACCAAAATCCATCACCATGGCCTCATCAGAAGCTGATTCTTGGTTCCTGGGTTGTCTGTTTCTCACTGCATGCTGCTGTTCTTGGTCAATCTGGCTCATTTTGATGGTTCCTGCCTCTAAAAGCCACCCAGATCCCTTGTCCTTTTCAGCTTGGATGTGTTTTATGGCAACACTGCAATCAACGTTAGTGGCACTACTGTTGGAACAAGATCCACATGCATGGAAGATTAATTCTCTACTTGAATTTGGTTCTGCGATATATGCAGGAGTTATGGGATCTGCAGTAACATTCTTTATCCAAACATGGTGCATCTCAGTCGCAGGTCCTCTTTTCAGTGCAATGTTCAAACCTCTTATGGCAGTCATTGTCACCATATTGGCTCCTTTATTATTACATGAGCAAGTATACTTTGGAAGCTTGATCGGATCAATAGCAGTGATAATTGGGTTGTATATTGTGCTATGGGGTAAAGCTGAAGAAGTTGTGGTTGTGAATGTTAAGACAGATTCAGAATCAATGCTTAATCACACAGAGGAAATCAAAATATCCATAGCATCTTCTAAAACCAATCTGGAAGAACCCTTTCTATCTCCTCATTCTCCTTCACATAATTAA 1110 0.4072 MGWLRSYLPVMGMVLNQIIYAGVSLSTSLVYSAGMSPRVFVVYRHVLATIVIAPIAYFSRRNSGSYYLNLKSFSWIFLISFIGIVLNQNFFSEGLYLTNSSVASAFVNLVPAVTFVIASCAGMEKVNIRSWRTIAKIVGTVICVSGAMSIALLKGPKLLNAENLPPKSITMASSEADSWFLGCLFLTACCCSWSIWLILMVPASKSHPDPLSFSAWMCFMATLQSTLVALLLEQDPHAWKINSLLEFGSAIYAGVMGSAVTFFIQTWCISVAGPLFSAMFKPLMAVIVTILAPLLLHEQVYFGSLIGSIAVIIGLYIVLWGKAEEVVVVNVKTDSESMLNHTEEIKISIASSKTNLEEPFLSPHSPSHN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0681 369 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Vra9g0681 369 Pfam EamA-like transporter family 18 144 IPR000620 GO:0016020|GO:0016021
Vra9g0681 369 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
Vra9g0681 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 322 - -
Vra9g0681 369 PANTHER WAT1-RELATED PROTEIN 10 351 - -
Vra9g0681 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0681 Vra-Chr9 7758034 7764509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0681 1 369 Nodulin-like Gene Family AT4G30420 48.285 6.05e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0681 - - var:108346816 570.852