Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0680 ATGGGATGGTTAAGGTCGTATCTGCCAATAATAGTTATGGTGTTGAATCAGTTCATTTATGCAGGAGTTAGTCTCAGCACAAGACTTGTTTTCTCAGCAGGAATGAGTCCAAGGGTCTTTGTGGTCTATCGCCATGTTCTTGCAACCATTGTAATGGCTCCAATAGCTTATTTCTCACGCAGAAACTCTCGCTCCTATTGCTTGAACTTGAAGAGTTTCTCATGGATATTCTTTGTCTCTTTCATAGGAATTGTCTTGACTCAAAATCTGTTTAGCGAGGGTTTATACCTGACAAATTCTGCGGTGGCAAGTGCATTTGGGAATCTTGTTCCAGCAGTAACATTTGTGATAGCAGCTTGTGCAGGAATGGAGAAAGTGAACATTGGAAGCTGGAGATCTATAGCGAAGATAGTAGGAACAGTGATATGTGTGAGTGGAGCAGTGTCCATAGCTTTGTTAAAGGGTCCAAAGCTTCTAAATGCAGAAAACCTGCCATCAAAATCCATCACCATGGTCTCATCAGAAGCTGCTTCTTGGGTCTTGGGCTGTCTGTTTCTCACTCTATCCTGCTTTTCTTGGTCAATCTGGCTCATTTTGATGGTTCCAGCCTCTAAAAGCCACCCAGATCCATTGTCCTTTTCAGCTTGGATGTGTTTTATGGCAACACTGCAATCAGCGTTGGTGGCATTAGTGTTGGAACAAGATCCACTTGCATGGAAGATTAATTCTCTATTTGAATTTGGTTCTGCTATATATGCTGGAGTAATGGGATCTGCAGTATCATTCTTTATCCAAGCATGGTGCATCTCACTCGCAGGTCCTCTTTTCAGTGCAATGTTCAATCCTCTTACGGCAGTCATTGTCAGTATATTGGCTCCTTTATTACTACAGGAAGAAGTATACTTTGGAAGCTTGATTGGCTCAATAGCAGTGATAATTGGGTTGTATATTGTGCTTTGGGGTAAAGCTGAAGAAGTTGTGGTTGTGAATGTTAATACGGATTCAGAATCAATGCTTAATTCCACAGAGGAAGTCAAAATATCCATAGCATCTTCTAAAACCAATTTGGAAGAACCTCTTCTATATGCTCATTCTCCTTCACATAATTAA 1110 0.4099 MGWLRSYLPIIVMVLNQFIYAGVSLSTRLVFSAGMSPRVFVVYRHVLATIVMAPIAYFSRRNSRSYCLNLKSFSWIFFVSFIGIVLTQNLFSEGLYLTNSAVASAFGNLVPAVTFVIAACAGMEKVNIGSWRSIAKIVGTVICVSGAVSIALLKGPKLLNAENLPSKSITMVSSEAASWVLGCLFLTLSCFSWSIWLILMVPASKSHPDPLSFSAWMCFMATLQSALVALVLEQDPLAWKINSLFEFGSAIYAGVMGSAVSFFIQAWCISLAGPLFSAMFNPLTAVIVSILAPLLLQEEVYFGSLIGSIAVIIGLYIVLWGKAEEVVVVNVNTDSESMLNSTEEVKISIASSKTNLEEPLLYAHSPSHN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0680 369 PANTHER WAT1-RELATED PROTEIN 10 351 - -
Vra9g0680 369 Pfam EamA-like transporter family 9 144 IPR000620 GO:0016020|GO:0016021
Vra9g0680 369 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Vra9g0680 369 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
Vra9g0680 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 145 - -
Vra9g0680 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0680 Vra-Chr9 7748511 7756169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0680 1 369 Nodulin-like Gene Family AT4G30420 49.077 6.05e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0680 - - var:108346816 573.548