Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0661 ATGGATCAAAGAAAGGTGTTGGAGGAGCTTCTGAGAGGTTATGAATCTGCTACTAAACTTCGAGTAGTGATGAATGAAAAAGATGAGTCTGAAATAAGAACCCTTCAAAGTCTTGCCAAGAACGTGCTTAGATCATTCACCAACACCCTCTTCCTCTTGGACTCTCATCTTCTCTCTCCCATCAAATCTGAGGACTCCCAAGAAAGCTGCAAGACTTTCAACAGAAGAGGCTGCTACAAGAGAAAAAGAAGTACACAAGAATGGGAGAAGGTTTCAGAAGCTCCATCAGTTGATGATGGCCATCACTGGAGAAAGTATGGCCAGAAAGATATCCTCAAAGCTAAATACTCAAGGAATTATTACAGGTGCACTCACAAGTATGATCAGAATTGTCAAGCAACAAAACAAGTGCAAAGAATTCAAGAGAATCCTCCCTTGTACAAGACCACATATTTTGGTCACCACACATGCAATGACTTGCTAAGTTCTGAAATCATACTTCATTCCAATGATTCTCCTTCTGACACTTCCATACTGCTAAGTTTTAACAACAGCTTCCCAGCTCCAACCAAGCAAGAATGTCCCTTTTTATCATCCTCATCATCATTATCATCTATCAACCCCTCACCATCACTGATCACAGAGGAGACAATTCCATCATTTTATGATGATTACATGCTATCCTCAGAACCCACTTTGAATGATTATTCAATGCACAATCACTGGGATGATATGTCTTCTGCCTTGTCTGATTTTGACATTGACGACATCAAACGTTGGTTCGATTTGGATGATTAA 798 0.401 MDQRKVLEELLRGYESATKLRVVMNEKDESEIRTLQSLAKNVLRSFTNTLFLLDSHLLSPIKSEDSQESCKTFNRRGCYKRKRSTQEWEKVSEAPSVDDGHHWRKYGQKDILKAKYSRNYYRCTHKYDQNCQATKQVQRIQENPPLYKTTYFGHHTCNDLLSSEIILHSNDSPSDTSILLSFNNSFPAPTKQECPFLSSSSSLSSINPSPSLITEETIPSFYDDYMLSSEPTLNDYSMHNHWDDMSSALSDFDIDDIKRWFDLDD* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0661 265 SUPERFAMILY WRKY DNA-binding domain 92 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra9g0661 265 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 251 - -
Vra9g0661 265 Gene3D WRKY domain 81 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra9g0661 265 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 251 IPR044810 GO:0003700
Vra9g0661 265 SMART WRKY_cls 97 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0661 265 Pfam WRKY DNA -binding domain 98 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0661 265 ProSiteProfiles WRKY domain profile. 92 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0661 Vra-Chr9 7543740 7545035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0661 5 158 WRKY Transcription Factor Family AT3G56400 36.872 1.61e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra9g0661 WRKY 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0661 - - vra:106773231 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0631 4 11816783 11818662 Vra9g0661 9 7543740 7545035 PCT