Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0638 ATGTCTAAGGAGGTGAATGAGCAAATTGTTGGGGCAACAAATAATTCTGTTGATTGTAGTGATGCATTTAACACCACAGAGATTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCTCGCGATGTTGCAAAGGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAACCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGTGATAGAAGTGGAAAATATAGAGGACTATACAAGAATGAATTATCCCAAAAGGTAAATAGCACTAGAAAATGTGAGTGTCCCTTCAGGTTAAGGGGAAAAGCTTTGAAAAAGGCTGAAGGATGGACTGTTAAGGTAATGTGTGGTTGTCACAATCACGAATTGGAAGAAACATTGGTGGGTCATCCCTATGCAGGCCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTTTTGACATTGAAAGATTATAATATGGATAATGTAACTACCATCAAGCAGATTTACAATGCTCGACATGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTTCTGAAATTATTGGAACGTGAGCGGTATGTGTACTGGCATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATATTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCTTGATAATTGATAGTATTTACACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGTGTTACTTCAACTGAGTTAACATTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCTAGCTGACAACTTCACTTGGGCACTACAGAAGTTAAGAGGATTGATTGTTAAAGACGAAGACATACCTCAGGTGATTGTGACTAACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTGTAATTTGTTATGTCGGTCTCATATCAACAAGAATGTGAAGTCCAAATGCATGTCAATAGTCCATCCAAAGGAGAAACAAGAATTGGTGATGAATGCATGGGATGTTGTTGTGAATTCTTCTAATGAGAGTGAGTATATGCAGCGACTGGCACTATTTGAAAAAGTTTGCTCTGGTTTTCCTAATTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCACACAAGGAAAAATTTGTCACTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCGATAGGGTTGAGTCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACACTGAGATTAAGTTGTCATTTGAGAAAAGCATAAATGTAGTGGATCATATGCATAATACTCCGTTATACATCAAACTACAAGGACTTGTATCATGGAGTGCATTGAGTCATATAACTGATGAGTATGACCGAGTTAAGGCTGTTGGTACTGATAGTTCTAAATGTTATTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTGCTAAGTACAGTACAATGTGTCATCCTGTTCCCTTGGAGGCAATTCACGTTCACTGGAAGAAGTTAAACTTTATTGATGGAGGAATGAATGATGAGGAGTATGAGTTATCGTTGCAACCTGAATTGGATGCCTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAATTAGTTCTAAAGGCTAAATTACACGAACTAGCATTTCCTGATACAACTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCTGCAAAAAGAGACAGATCAATTCATTCCGATATTTCACAATGGGGGCATGTTGACGCAATGCGTCCTACCCATAGTGGCTCTTCATCTTGCCCTTCATCTCATCAACTAGTCCATGATTCTAAACGAAGAAGAGTTCTGTCAATGATGGACCAATTTCCTATTCAGATCCATCCGTTTATTGAAGAAATTATTGATGTGAAAGCAGATTCAAATTGTGGTTATCGTGCTGTTGCTGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATCAGAGAGCTTCAGCAGTGGCAAGATATTTATGCCAAACTCTTTGGTAGCAATGATCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACATCTATTAAAAAGTGGATGACTATACCAGATATGGGTTATGTAATTGCCTCAAGATACAACGTGGTTCTAGTTGCTTTATCCTTGAAGGAGTCCATGACATTTTTCCCTCTCAGAGGACGACCACCACTATCTGAGTCAAGGCACCGACTTATTGCCATTGGGTTGGTCCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGAGTCGCCATTACCTCCCACTGCTTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTATTCGAATGGAACATTTTAGGTCATTGTTTCCACAAAAAAGAAATGATTATGTAAACGTTATTGGGGACTAA 2598 0.3903 MSKEVNEQIVGATNNSVDCSDAFNTTEIFPSRDAMLNWARDVAKENGFVLIILRSETSTKPTRTTRRNQRKTFVILGCDRSGKYRGLYKNELSQKVNSTRKCECPFRLRGKALKKAEGWTVKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARHAYRSSQKGLEMQYLLKLLERERYVYWHRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESELADNFTWALQKLRGLIVKDEDIPQVIVTNRDISLMNAVQVVFPSSCNLLCRSHINKNVKSKCMSIVHPKEKQELVMNAWDVVVNSSNESEYMQRLALFEKVCSGFPNFGEYVKNMWLIPHKEKFVTSWTNQVMHLGNTTTDRVESTNCKLKNLLQDSKEDMCSYWDAMNDMITLQHTEIKLSFEKSINVVDHMHNTPLYIKLQGLVSWSALSHITDEYDRVKAVGTDSSKCYCIVRTTHGLPCACELAKYSTMCHPVPLEAIHVHWKKLNFIDGGMNDEEYELSLQPELDALLKRFQELDCAGKLVLKAKLHELAFPDTTSKCPTPTVVRIKGAAKRDRSIHSDISQWGHVDAMRPTHSGSSSCPSSHQLVHDSKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYAKLFGSNDRVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVALSLKESMTFFPLRGRPPLSESRHRLIAIGLVHDCHFVQVALKAESPLPPTALQWSRYCSAESRSWETSYVIRMEHFRSLFPQKRNDYVNVIGD* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0638 865 Pfam MULE transposase domain 245 341 IPR018289 -
Vra9g0638 865 ProSiteProfiles OTU domain profile. 679 814 IPR003323 -
Vra9g0638 865 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 98 513 IPR031052 GO:0006355
Vra9g0638 865 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 98 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0638 Vra-Chr9 7351041 7357840 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra9g0638 MULE 1.5e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0638 - - gmx:100805365 1375.15