Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0628 ATGCCTCGTGGAAAGCTTGAAGTTATTTTGATCAGTGCCAAAGGCCTTGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAAGACACAGGAGCACAAGAGCACTGTGCAAGAAGATTCTGGATCCAAACCTCAATGGAACGAGAGCTTTCTTTTCACTGTTTCTGACAGTACTTCTGAACTGAATCTCAAGATCATGGATAAAGACAACTTTACTAAGGATGATTTTCTTGGCGAGGCAAACATTGATTTAGGTCCACTGTTTGAAGTGGGTAGCCTTCCAGAAACTGTTCACAAGGTTGTGAAGGACGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTCACTCCTGAGAGAAACGAGGAGCAGGAATACAGTGTAGGGGAAGAGAGCTATGGTGGATGGAAAGAATCAAGTGGGGAATTCTAG 450 0.4267 MPRGKLEVILISAKGLDDNDFLSSIDPYVILTYKTQEHKSTVQEDSGSKPQWNESFLFTVSDSTSELNLKIMDKDNFTKDDFLGEANIDLGPLFEVGSLPETVHKVVKDEEYCGEIKVALTFTPERNEEQEYSVGEESYGGWKESSGEF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0628 149 SMART C2_3c 5 102 IPR000008 -
Vra9g0628 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Vra9g0628 149 PANTHER C2 DOMAIN-CONTAINING 1 149 - -
Vra9g0628 149 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 149 - -
Vra9g0628 149 MobiDBLite consensus disorder prediction 127 149 - -
Vra9g0628 149 Gene3D C2 domain 2 125 IPR035892 -
Vra9g0628 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 127 IPR035892 -
Vra9g0628 149 Pfam C2 domain 4 95 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0628 Vra-Chr9 7224947 7227101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0628 4 94 C2H2 Transcription Factor Family AT4G21160 38.462 4.68e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0628 - - gmx:100500006 256.914