Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0611 ATGGATATAGCTTTTAGGTTACCGCAGTCAAATGTGGTATTAGATGGTTTGGATTCTTGCACTGTATTTGGCGGGAGAGGTTTTTGTTGCGCTTTTCTCGGCATGTCGAGGACTATTTCGAAGGCTCGTTTTAGTGGAACGAACAAGATAGGTAGTTGGAGTTGTTCGAGAGTAGACTGTTTCGGAGAGTTGAAAGTTTCGAGTGGGAAGAGGAGTATGTGTTGGAAGAGAAATAAACTTTTTAGGGGGAGTAGAAAAATTTGGACAAAGTGTCAGGGTAACGATTCTTTATCATATGTCAATGGCAATGGGCGGAATGTTGATAGGGTGGAAAGTGCGGATGAGGACTCTGGTTCCAGTGCTGAATCTTGTGAATCTTTGGGTGAAGAAGGGCAAGAAGGGAGGAAAGAAGCTGGGGGTGAAGTAGCGGAGGAGCAAAATGTGGATGAATTGAAAGAACTGCTGATAAAGGCCAAGAAAGAATTAGAGGCCGCTCGAGAAAACAGCGTTGCATTTGAGGAAAAGGTTAAGAAGATATCAGAGACTGCGATTTTCTTGCAAGACGAAGCAGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATATCATCCAAGATATTGTGGGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCCCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAGTCTTACGAGGCTACAAAAGAAGCTTACGATTCCTCACAAGGTTCTAACAACATTAATGATGATAAAGATATAATGCAGGAAGCGAAGGAACTTTTGGATGCTCAGGAAGATATCAAGGAAGGCCAGACAAATTTATCAAATTGCGAGGATGAGCTGAGAGGCTTGCAATGTAGAAAGGAGGAGTTGCAGAATGAAGTGAACAATTTGCATGAAGTTGCAGAACAGGCGCAGCTGAAAGCAGCAAAAGCAGATGAAGATGTTGCAAGCATAATGCTTTTAGCGGAAAAAGCTGTTGCTGCCGAAATTGATGCTGCACAACAGGTGAATGATGCAGAGATTGCATTACAGAAAGCAGAAAAAATTGCCTCTAGTTTTAAAGCTGATACCAAAGACAGTCTACAAGGACAAGAGATTGTAGCTATTTCCGAGGACGAGGAAGTGGGTCAAGGCTTTTCTGGTGATGATGTCGTTAAAAGGGAGGCTGATCTTTCAAATGATGATGAGCTTTTGCTAACCGAAACAAAATCTGACAACAGTAGGCAAAGTTTGGAAGACATGGCACAGTCTGATTATCTGAGTGATCATGAGAACGGACAATTAAGCTTAGACTCTTCTAAAGAAGCTGAAGTTGAAACAGAGAAGTCAAAGAATGTAGTTCAAACAAAAAAGCTGGAAACACAAAAAGATTTGACTAGAGATAATTCATCATTTTTTCCAAAGGCATTATTGAAGAAATCTTCCCGATTTTTTCCCGCATCATTCTTCTCTTTTACTGCCGATGAGACTGATTACACACCTGCATCAGTTTTCCATGGTCTTATGGAGTCTGCACAGAAGCAACTAGCCAAGCTAATTGTTGGGTTATTGTTAATTGGAGCAGGGCTTGTACTCTATAGCAATAGAGCCGAAAGGGGTGCTCAGCTGCTTCAGCAACCGGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCTCTGGTTAGAAAGCTTCAGGATCTTCCCAGGAGAATTAAGAAAATTATTGCATCATTACCTGATCAGGAGGTGGATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTCCTTGCAAGTGTTGTATTTGTACCAATTTTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGGTACTTGGCTGCTGGTATCTTGATTGGGCCATATGGTCTTTCCATTATTCGTCATGTACATGGGACAAAAGCAATAGCCGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTTTCTGTTGAAAGGCTTAGTTCAATGAAGAAGTATGTCTTTGGATTGGGATCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTTGGCTTGGTAGCTCATTATATTTGTGGTCAAGCTGGCCCTGCTGCCATTGTCATTGGGAATGGTCTAGCATTATCATCAACTGCTGTTGTTTTGCAAGTGTTACAGGAGAGAGGTGAAAGCACATCACGGCATGGAAGGGCTACGTTCTCGGTTTTACTTTTTCAGGATTTGGCAGTGGTTGTCTTGCTAATACTCATACCTCTAATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATTGCTGAAGCACTTGGTCTGGCCGCTGTTAAGGCATTGGTTGCCATTGCTGCCATAATTGCAGGTGGACGATTGCTCCTGCGACCCATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTCGTTATTCTTGGGACTAGTCTTCTCACAGCCAGGGCTGGACTTTCAATGGCATTGGGGGCATTTTTGGCAGGTTTACTATTGGCAGAAACAGAGTTTTCCTTACAGGTTGAATCTGATATTGCCCCGTACCGTGGCCTTCTTCTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTTCAGTCGTTACTGGGACCTTGGGACTTTTGATATTGGGCAAGACTTTCTTGGTTTCTTTAATTGGTAGAATATTTGGTATTTCTCTCATTTCTGCTATTAGAGTTGGCCTTCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCGGTTAATCAGGGCATAATGTCTTCCCAGTTGTCCTCCTTACTGTTTCTTGTTGTGGGGATTTCAATGGCCCTCACTCCTTGGCTAGCTGCAGGAGGGCAGTTCCTTGCTTCCCGTTTCGAGGTGCATGATGTGCGAAGATTATTACCTGTAGAAAGTGAGACAGACGATTTGCAAAATCATATCATTATTTGTGGATTTGGGCGAGTTGGGCAAATCATCGCACAACTTCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGACGTGCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGGTTGGAGCTGAAAGGGCAAGTGCCGCTGCAATAACTCTAGATTCACCTGGAGCTAATTATAGAACAGTTTGGGCTTTGAGCAAATACTTCCCAAACGTCAAAACTTTTGTTCGGGCTCACGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCTGCTGCGGTTCTTGCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCAACCATAAACGAATTCAGATCCCGCCATCTGTCTGAGCTAACTGAACTATCTGAAACAAACGGAAGTTCTTTTGCATATGGATACAATAAAATTGCAACCAAACCCAATTCGTCAGACGATACTCAGTTCTCTGAAGGGAAACCGGCGACATGA 3588 0.4314 MDIAFRLPQSNVVLDGLDSCTVFGGRGFCCAFLGMSRTISKARFSGTNKIGSWSCSRVDCFGELKVSSGKRSMCWKRNKLFRGSRKIWTKCQGNDSLSYVNGNGRNVDRVESADEDSGSSAESCESLGEEGQEGRKEAGGEVAEEQNVDELKELLIKAKKELEAARENSVAFEEKVKKISETAIFLQDEAASAWNNVTSTLDIIQDIVGQEFVAKEAVQKATMALSLAEARLQVAIESYEATKEAYDSSQGSNNINDDKDIMQEAKELLDAQEDIKEGQTNLSNCEDELRGLQCRKEELQNEVNNLHEVAEQAQLKAAKADEDVASIMLLAEKAVAAEIDAAQQVNDAEIALQKAEKIASSFKADTKDSLQGQEIVAISEDEEVGQGFSGDDVVKREADLSNDDELLLTETKSDNSRQSLEDMAQSDYLSDHENGQLSLDSSKEAEVETEKSKNVVQTKKLETQKDLTRDNSSFFPKALLKKSSRFFPASFFSFTADETDYTPASVFHGLMESAQKQLAKLIVGLLLIGAGLVLYSNRAERGAQLLQQPEVIATTVEEVSSTAKPLVRKLQDLPRRIKKIIASLPDQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKALVAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFSVVTGTLGLLILGKTFLVSLIGRIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQFLASRFEVHDVRRLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERASAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELSETNGSSFAYGYNKIATKPNSSDDTQFSEGKPAT* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0611 1195 MobiDBLite consensus disorder prediction 437 455 - -
Vra9g0611 1195 Pfam Sodium/hydrogen exchanger family 601 972 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra9g0611 1195 Coils Coil 268 323 - -
Vra9g0611 1195 MobiDBLite consensus disorder prediction 429 455 - -
Vra9g0611 1195 Coils Coil 141 182 - -
Vra9g0611 1195 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 603 883 IPR004771 GO:0006812|GO:0008324|GO:0016021
Vra9g0611 1195 Pfam TrkA-N domain 1005 1118 IPR003148 GO:0006813
Vra9g0611 1195 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1194 - -
Vra9g0611 1195 ProSiteProfiles RCK N-terminal domain profile. 1004 1126 IPR003148 GO:0006813
Vra9g0611 1195 MobiDBLite consensus disorder prediction 128 145 - -
Vra9g0611 1195 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1001 1142 IPR036291 -
Vra9g0611 1195 MobiDBLite consensus disorder prediction 108 145 - -
Vra9g0611 1195 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1194 - -
Vra9g0611 1195 Gene3D - 592 977 IPR038770 -
Vra9g0611 1195 Gene3D - 1000 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0611 Vra-Chr9 6947287 6955850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0611 91 1191 Inorganic Solute Cotransporters AT4G00630 69.437 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0611 - - gmx:100800772 1823.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0611 9 6947287 6955850 Vra9g0611 9 6947287 6955850 ECH