Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0598 ATGGTGACTATGGGAGCTTTAGCAATATCATCTCTTAATTTGAACCCATCAACATGTGACGTCATCGTTACTTTGATTGCGACGGTGCTGATATGGTGGTTCTGGAATGCTCTCAACTGGGTGTGGCTGAGACCTAAGAGAATAGAGAGGCGTCTGAAGGAGCAAGGTATCCAAGGCAATTCCTACCGTCCCTTAATCGGAGATATCAGAGATATGGTTAAAATGGTCAAGGAAGTCAAATCCAAACCCATGGATCCTCATTCTAATGACATTGCTCCTCGTGTATTGCCTTATGTCGTTCACACCATCGCTAAATACGGTAAGAATTCATTTATGTGGCTTGGACCACGACCAAGACTATTCGTATTGGATCCAGAAAAAATCAAAGAAATGGCTACAAAAGTTTATGACTTTCAAAAGCCCGACACAAGTCCACTTTTCAAGCTCCTGGCTTCAGGATTTGCAAATTATGACGGTGACAAGTGGGCTAAACACAGAAAGATAGTGAGTCCGGCATTCAATGTAGAGAGATTGAAGGTTTTAATACCGATATTTTGCGAGAGTTGCGATTTGTTGATCTCGCAATTGGAGAGTGTGTTATCTTCGTCCAATGGGTCGAGTGAGTTAGATTTATGGCCATTCGTTCAAAACGTGTCAAGCGACGTCCTTACTCGTGCAGGCTTTGGAAGCAGCTACCAAGAAGGAAAAAGAGTATTCGAACTTCAAAGGGAAATGCTTCAACTTACAATGACGCTTTTTAAGTTTGCTTTCATCCCAGGTTACAGGTTTCTGCCAACACATACCAATAGGAGGATGAAAGCAATTGACAACGAAATAAGAGCATCACTTATGAAAATCATCAACCGAAGATTGAAAGCAATGAAAACAGGGGAGCCCACAAACAATGACTTGTTAGGCATACTCTTAGAATCAAATTACAAAGAATCTGAAAAAAATACTGGTGGAGGAATGAGTTTAAGAGAAGTAGTTGAAGAAGTGAAGCTATTCTACTTAGCAGGACAGGAAGCAAATGCAGAGTTACTAGTCTGGACTCTGTTATTATTAAGCAAGCATCCTGATTGGCAAGCAAAGGCCAGGAAAGAGGTTTTTCAGGTCTTTGGTATTGAAAAACCAGATTATGAAAGGCTTGGACAGCTTAAAGTTGTGTCAATGATTCTACAGGAGAGTCTGAGATTATATTCACCTGCGGTTATGATCGCTCGGTATCTTCGTAAAGATACAAAACTTGGAGAGCTGACAATTCCTGCAGGAGTGGAGCTTGTAGTGCCTGTGTCAATAATACATCAGGAAAAGGAGTATTGGGGAGATGATGCAGGAGAGTTCAATCCAGAAAGATTCTCAGAAGGTGTTTCAAAAGCAACAAAAGGGAAGCTTTCATACTTGCCATTTGGATGGGGTCCTCGTCTCTGCATAGGACAAAACTTTGGTTTGTTAGAAGCAAAAGTAGCAGTGTCAATGATCCTGCAGCGTTTCTCCCTCGAGTTTTCTCCCTCTTATACTCATGCCCCCTCCTTTATTATTACTCTGCAGCCTGAGCGTGGGGTTCATATCATTTTACACAAACTGTAG 1590 0.4164 MVTMGALAISSLNLNPSTCDVIVTLIATVLIWWFWNALNWVWLRPKRIERRLKEQGIQGNSYRPLIGDIRDMVKMVKEVKSKPMDPHSNDIAPRVLPYVVHTIAKYGKNSFMWLGPRPRLFVLDPEKIKEMATKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVERLKVLIPIFCESCDLLISQLESVLSSSNGSSELDLWPFVQNVSSDVLTRAGFGSSYQEGKRVFELQREMLQLTMTLFKFAFIPGYRFLPTHTNRRMKAIDNEIRASLMKIINRRLKAMKTGEPTNNDLLGILLESNYKESEKNTGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSKHPDWQAKARKEVFQVFGIEKPDYERLGQLKVVSMILQESLRLYSPAVMIARYLRKDTKLGELTIPAGVELVVPVSIIHQEKEYWGDDAGEFNPERFSEGVSKATKGKLSYLPFGWGPRLCIGQNFGLLEAKVAVSMILQRFSLEFSPSYTHAPSFIITLQPERGVHIILHKL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0598 529 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 Gene3D Cytochrome P450 41 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 3 526 - -
Vra9g0598 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Vra9g0598 529 PRINTS E-class P450 group I signature 103 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 526 - -
Vra9g0598 529 SUPERFAMILY Cytochrome P450 94 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0598 529 Pfam Cytochrome P450 104 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0598 Vra-Chr9 6773927 6776276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0598 17 529 Cytochrome P450 AT3G14690 51.267 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0598 - K24179 gmx:100801959 946.421