Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0577 ATGGCCAACAAGGGAAGTCCAAAGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAATGGAGTTATGGGATCTTCTGGGCACCTTCAACTACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTATAATGGAGACATTAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACTAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAGTCACAATCAAAGTAGTTTGCCTGGAAAAGCACTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATATTCTCTCGTTCTTTGCTAGCAAAGAGTGCCTCAATTCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTCATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGATAAATATCCAACATGTACCAAGGGTGACCGCAGGGTGTTTGATGCAATGGCTCTGGAGAATCCATGTTCCCTTGAAAAGAAAATCAAATTTGATAATCATGATCATGTCAATGGATTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCATCATTACCCTATGGAATCCATGATTGATGGTATGCATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTGGTCATCGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTATAAACCAAAGAGAGGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACACTTTGTGCTATTTTGGGTAACTCATCAACATTTAAGGCAAACCCTTATGCCGGTAACTCAAACTGCAGATCGAGTTTTGCAAAATGGAAGAAAGGTAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAGTTGGAAAATGCTGGTGATGATTTCATGGAAAAAGCATTAACTGATAAGAAAAGAGAAGTTAAAAACTTCCATTTTGCTCCACCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATGCTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAAATGGACACAGAACTAGAAAGACTTGTTTGTGAAGAAGCAAAGGCATTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTTTGATTGAGATGAAATGTCCTTACAGAGAATACATACTCTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACGAGTGACGGTGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATGTTTGA 1944 0.4095 MANKGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFSHNQSSLPGKALEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDRRVFDAMALENPCSLEKKIKFDNHDHVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMHGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCRSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDDFMEKALTDKKREVKNFHFAPPSISEEEKISILGDTIKYLKRLETRVEELESYMEVADAEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERLVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0577 647 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 202 IPR025610 -
Vra9g0577 647 PANTHER TRANSCRIPTION FACTOR MYC1 8 644 - -
Vra9g0577 647 Coils Coil 490 510 - -
Vra9g0577 647 PANTHER TRANSCRIPTION FACTOR TT8 8 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0577 Vra-Chr9 6465154 6470439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0577 15 643 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.110 3.17e-117 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0577 - - gmx:100783746 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0577 9 6465154 6470439 Vra9g0577 9 6465154 6470439 ECH