Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0570 ATGGCAAAGAAGTCCCAAAGACGCCATGTGCGGTTTGAGAAAGATAAATCAGGCTGCATGTGGGGTTTTATTAGTATGTTTGATTTTAGACATGGTCATTCCACTAGGAAGATGATTGCAGACAAGAGACGAAGCAGCAAACATGCTGTTGGGGCCATAAATTCTAAGACTAAGTTCGAGAATAGAAATTTGGATGAAGTTTATCAATCCAGTTCGGACAGTGGAGAGAGTAGAAGACCAACAATTGTGACTGCTGCTAATAAGCCTAGCGTGAAGAAACTCATTGAAGAAGAGATGTTCATTGATCAGAATAAAATGAAGGATACAGATAGTGCTCAAATAGAATCAAAGGAATCCAAATTAAGGCGTGATGTACTCTTGAAGTTAGATTCCAAAAGGAATAAGAAATTTTACAAGAAAAACTGTGATAAGGACATCAATGATTTAAATTTGGATACAACCTTGAAATCTGAAATCACACATGATAAGCACTCAAGGAAACAATCTAAAGATAATCTTGATCTGGATAAGATGATTGCAGAGTTTTGCCATCTAAAAGATGTTTGTTCAATGATGCATGGCAATGATATAGAAGTAGAAGTTGAAGCACAATCAAACCAGAAGCAAGCTATTTCTGAAAATGCAAGAGAAGCAATTTGTGAATTTGTGAATCAGATGGTATTAAATGGAAAAGATCCGGCTGAAGCCAGAAAATTCCTTTGCTCCCATCAACTTATGGAAGCTATTGAGCTTCTAAGTTCAGATAAGGAATTGTTTCTTTCACTTCTACAAAATCCGAATTCACTGTTGTTGAAATGTGTTCAAGAGTTTAGGAATTCTCAGGGAACAAATGAAAAAGAATATGGTCCAGTAGTTGGTTCCAACTTCTCCGAACAAGATCATGGCAACCTGAAACAAAATGGGGATCTAGTTAACCACAAGAAGCATAACTTTTTCAGAAAAAAGATGAAGTCTCATTCAAAAAGTTCAGCAAATGAGAACGGGAACACTAATTTATCAAGTATTGTTATTTTGAAGCCTGGGCAGATGGGCTGGCAAAATTCTGAAACTGGAAAAAACCTTGCCTCTTATCAAGATTCATATGATGTTGTCAAATACAATGGTCCTTCTGTGAGAGGTAGTTCACATTTTTCTCTCACAGAGATAAAAAAGAAATTAAAGCATGCTATGGGAAGGGAGAGACATGGAAACCCTGAAGGGATCTCAAAAAGGCACCCTGCTGCTGAATGTCAGAATAGGAGGCCTAGCAGCAAAGTCATTGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCACTTTTTCATTGAAAAAATTGGAAGACCTGCCACTGGTGTTATGAAAGGAGACAAGCCTAGTACAACTAAAGATGTTGAATTGACAATGGAACATGAAAATGGTAGTCGTCCAAAACAAAGGGTTTCTAACTTATATATTGAGGCTAAGAAACATTTGCGTGAAATTGTAGGTAATGGAGATGAGAAAATAGACTTGTCAAGTAGGCAGATCTCTAGAACCCTTGGCAAAATACTATCTCTTCCTGAGTACAGCTTTTCTCCCTTTGGCAGTCCTAGAAGGGATTGGGAGCATCATTCAGTAACTGCACAGAAAATATTTTCCACTTCAGATAAGATTTGGGTGGGTAATAAGGATAATCTGTCTCCCAAACAAGAGTCCTCTGTTGGTCATTTGGATCAGGAAATAGACAATTCAGAGGAGCAGTCAATAATTTGTGACGAAATCTCTAATAACAAAGTTCAAGAAAATAAGTCAGACTCAAATGTTGCAAATGACCGCGGCCATGTTGATGAAGCACAAAAACTTTGTCCTGATAGAGATGAGATAGTTACTGGAGGTGATGTAGAATTTGCACAAGAGGTGAATGTTTTGGAATCTTCCTCACAACCAGTTGACCTCAGTGTAGGAAAGGAATACCAAAACTATGGTCTCTCAGAAATTTCTGATTGTGCAAAATGCTCTAAATGTTCAAAGCAGGATGTAGAAAAAGAACACAAACCAACATCTCCTCTATTATCTCCACCCCACCATTCCACCACCAAAGAAATTACAGATGCATCTGGGCGGCCAAGTCCCATATCTATTCTTGACACACCGTTCTTTGAAGACGAAGTTCAGCCTGTTGAAGTATCAGTCCGACCACTGCAATTTGGAGAACAATACTCTTCACCTTTGCATGAAATCAATAAAGAAAAGTATTGTCTTAAAGAAAATGAATGGATATATGATTACATCAAAGCAATTCTGCAAACCTCTGGATTGACTATAGATCAATTGTCAATGGAATGCCTTTCCTCAGACAAGATCCTAGATCCTTCCTTGTTTGATGAGGTAGAGTTACCAAACCAGATTTGCCATGATCAGAAGCTCATTTATGACTGTGCCAATAATGTTCTCATGGAGGTTTGTCAGAATTACTTCAGGTTCTCACCTTGTGTGTCATTCATAAAACCTGGCATAAGGCCTTCTCCAAACATGATGAAAATTATTGTCAAAGTCTGGGAAGGAGTGTGTTGGCATTTCCTTCCCTTGCCCCCACCCCGTACCTTAGACAAAATTATTAAAAAGGACATGGATAAAAATGGAACGTGGATGGACCTTAGACTTGAAGCTGAAACCATTGGTTTTGAAATGGAAGAAGCCATTCTTGCAGAACTGATGGAAGATACAATACTAAGCTGTGTAAGCAAAAGTTCAGAAGGAACATAA 2751 0.3806 MAKKSQRRHVRFEKDKSGCMWGFISMFDFRHGHSTRKMIADKRRSSKHAVGAINSKTKFENRNLDEVYQSSSDSGESRRPTIVTAANKPSVKKLIEEEMFIDQNKMKDTDSAQIESKESKLRRDVLLKLDSKRNKKFYKKNCDKDINDLNLDTTLKSEITHDKHSRKQSKDNLDLDKMIAEFCHLKDVCSMMHGNDIEVEVEAQSNQKQAISENAREAICEFVNQMVLNGKDPAEARKFLCSHQLMEAIELLSSDKELFLSLLQNPNSLLLKCVQEFRNSQGTNEKEYGPVVGSNFSEQDHGNLKQNGDLVNHKKHNFFRKKMKSHSKSSANENGNTNLSSIVILKPGQMGWQNSETGKNLASYQDSYDVVKYNGPSVRGSSHFSLTEIKKKLKHAMGRERHGNPEGISKRHPAAECQNRRPSSKVIGKDNVGMRSPNKDHFFIEKIGRPATGVMKGDKPSTTKDVELTMEHENGSRPKQRVSNLYIEAKKHLREIVGNGDEKIDLSSRQISRTLGKILSLPEYSFSPFGSPRRDWEHHSVTAQKIFSTSDKIWVGNKDNLSPKQESSVGHLDQEIDNSEEQSIICDEISNNKVQENKSDSNVANDRGHVDEAQKLCPDRDEIVTGGDVEFAQEVNVLESSSQPVDLSVGKEYQNYGLSEISDCAKCSKCSKQDVEKEHKPTSPLLSPPHHSTTKEITDASGRPSPISILDTPFFEDEVQPVEVSVRPLQFGEQYSSPLHEINKEKYCLKENEWIYDYIKAILQTSGLTIDQLSMECLSSDKILDPSLFDEVELPNQICHDQKLIYDCANNVLMEVCQNYFRFSPCVSFIKPGIRPSPNMMKIIVKVWEGVCWHFLPLPPPRTLDKIIKKDMDKNGTWMDLRLEAETIGFEMEEAILAELMEDTILSCVSKSSEGT* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0570 916 PANTHER (, RELATED) 1 913 - -
Vra9g0570 916 MobiDBLite consensus disorder prediction 399 418 - -
Vra9g0570 916 MobiDBLite consensus disorder prediction 399 435 - -
Vra9g0570 916 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 913 - -
Vra9g0570 916 MobiDBLite consensus disorder prediction 678 704 - -
Vra9g0570 916 MobiDBLite consensus disorder prediction 686 701 - -
Vra9g0570 916 Pfam Domain of unknown function (DUF4378) 757 903 IPR025486 -
Vra9g0570 916 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0570 Vra-Chr9 6378853 6385189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0570 1 891 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.659 6.32e-98 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0570 - - gmx:102667950 1364.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0570 9 6378853 6385189 Vra9g0570 9 6378853 6385189 ECH
Vra4g0773 4 14477522 14483973 Vra9g0570 9 6378853 6385189 PCT