Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0510 | ATGGAAAGCCAAGACCCTCCAAACCCTTCTCCCTTCGTTTTCACTCCCACGTCAATGATGCAAAACCCTTTGGAGCCTCAAGGCTTGCAGGATGACATAGACTGGGTTAGCCTTTTCTCTAGCCAAAACAGTTTCCTTGGGAATGCCAATCCCACGATGGAATACGCTTCTTCTTCGTCTTCATCTTCATCGACTTCATCATCCTTGTCATGTGCTTTGATCGCAGAAAACGGTTCTCACGTTGATGAAAAGAATGATAAAGAGAAAAGGAAAGGAGGCAGAGTGAAGAAGACAACACGACCCAGGTTTGCGTTTCAGACTAGAAGTGCAGATGATATTCTGGATGATGGTTATCGTTGGAGGAAGTATGGGCAGAAAGCTGTGAAGAACAACATGCATCCCAGAAGCTACTACCGGTGCACGCATCATACATGTAATGTGAAGAAACAGGTGCAAAGGTTGTCTAAAGACACAAGCATCGTGGTGACCACATACGAGGGTATTCACAATCATCCATGCGAAAAACTCATGGAAACCCTAACACCTCTTCTCAAGCAAATGCAGTTTCTCTCTAGGTTAGCTTCCAATAACAACACTTCTCCTGCTTCTCTGCTATAG | 618 | 0.4482 | MESQDPPNPSPFVFTPTSMMQNPLEPQGLQDDIDWVSLFSSQNSFLGNANPTMEYASSSSSSSSTSSSLSCALIAENGSHVDEKNDKEKRKGGRVKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSRLASNNNTSPASLL* | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0510 | 205 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Vra9g0510 | 205 | Pfam | WRKY DNA -binding domain | 115 | 172 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra9g0510 | 205 | MobiDBLite | consensus disorder prediction | 79 | 98 | - | - | |
Vra9g0510 | 205 | PANTHER | WRKY TRANSCRIPTION FACTOR 43-RELATED | 25 | 189 | - | - | |
Vra9g0510 | 205 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 25 | 189 | IPR044810 | GO:0003700 | |
Vra9g0510 | 205 | SMART | WRKY_cls | 114 | 173 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra9g0510 | 205 | SUPERFAMILY | WRKY DNA-binding domain | 107 | 173 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra9g0510 | 205 | ProSiteProfiles | WRKY domain profile. | 109 | 174 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra9g0510 | 205 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Vra9g0510 | 205 | Gene3D | WRKY domain | 99 | 173 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0510 | Vra-Chr9 | 5363820 | 5366508 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0510 | 93 | 194 | WRKY Transcription Factor Family | AT1G64000 | 76.699 | 4.19e-58 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vra9g0510 | WRKY | 2.4e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0510 | - | - | gmx:100810669 | 316.62 |