Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0510 ATGGAAAGCCAAGACCCTCCAAACCCTTCTCCCTTCGTTTTCACTCCCACGTCAATGATGCAAAACCCTTTGGAGCCTCAAGGCTTGCAGGATGACATAGACTGGGTTAGCCTTTTCTCTAGCCAAAACAGTTTCCTTGGGAATGCCAATCCCACGATGGAATACGCTTCTTCTTCGTCTTCATCTTCATCGACTTCATCATCCTTGTCATGTGCTTTGATCGCAGAAAACGGTTCTCACGTTGATGAAAAGAATGATAAAGAGAAAAGGAAAGGAGGCAGAGTGAAGAAGACAACACGACCCAGGTTTGCGTTTCAGACTAGAAGTGCAGATGATATTCTGGATGATGGTTATCGTTGGAGGAAGTATGGGCAGAAAGCTGTGAAGAACAACATGCATCCCAGAAGCTACTACCGGTGCACGCATCATACATGTAATGTGAAGAAACAGGTGCAAAGGTTGTCTAAAGACACAAGCATCGTGGTGACCACATACGAGGGTATTCACAATCATCCATGCGAAAAACTCATGGAAACCCTAACACCTCTTCTCAAGCAAATGCAGTTTCTCTCTAGGTTAGCTTCCAATAACAACACTTCTCCTGCTTCTCTGCTATAG 618 0.4482 MESQDPPNPSPFVFTPTSMMQNPLEPQGLQDDIDWVSLFSSQNSFLGNANPTMEYASSSSSSSSTSSSLSCALIAENGSHVDEKNDKEKRKGGRVKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSRLASNNNTSPASLL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0510 205 MobiDBLite consensus disorder prediction 1 25 - -
Vra9g0510 205 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0510 205 MobiDBLite consensus disorder prediction 79 98 - -
Vra9g0510 205 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 25 189 - -
Vra9g0510 205 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 189 IPR044810 GO:0003700
Vra9g0510 205 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0510 205 SUPERFAMILY WRKY DNA-binding domain 107 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra9g0510 205 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra9g0510 205 MobiDBLite consensus disorder prediction 1 28 - -
Vra9g0510 205 Gene3D WRKY domain 99 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0510 Vra-Chr9 5363820 5366508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0510 93 194 WRKY Transcription Factor Family AT1G64000 76.699 4.19e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra9g0510 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0510 - - gmx:100810669 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0510 9 5363820 5366508 Vra9g0510 9 5363820 5366508 ECH
Vra4g0818 4 15114661 15115792 Vra9g0510 9 5363820 5366508 PCT