Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0467 ATGAGAGAGATCAAGGAGCACAGAACAATGTGGAGCAGGAGGAGTAGCAGCTTCATCTTCACCCTCTTCCTCCTCATTGGACCAATATCTTGTCTTTCTTCTTCGACATCGATCAACAGAAGAATCCTCCACCAACCCTTTCAGCCAGAAGGGGGTTCCCCACCTCCCTCTGTTCCCCCAAACCCTCCTCCACAGCCATCTCCTTCACCTTCACCTCCAAACCCAAAGTACCCATTTTCCACCACACCCACCACCAATGCTTCCACACCCTTCTTCCCCACATACCCTTCTCCCCCACCTCCTCCCTCTCCTTCAGCCTTTGCTTCTTTCCCTGCTAACATATCCTCCCTCATCCTTCCCCAATCCTCAAAGTCCAAATCTTCCTCAAAAAAACTCGTCGCCGTCGCCATCTCCGCCGTCGCCTGCGCCCTCGCAGTTGTCGCCCTCTCAGCCTTCGTCTACTGTCGCCGCCGACGCCAAAGCTACTCCACTGACGAGAAAACTCTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGTGAAGCTTCTGTTGCCACCGGCGGGGGCCGTAAACCGAGAAACACCTCCTCTACCAGCTCCGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGGGGCGGCGGCGTCGATGAGCTCTCTGAGCCGCACGTTGCTGCGTTGAACCCCCGTAAAATGGACTCGCCGGAGCTTCAACCGCTGCCACCGCTGGCGAGACAGTCTTCCAGGCTTAGAGAGGAAACGGCGGCGACGGTGGAGGATGATGAAGAGGAATTCTACTCGCCGAGAGGGTCGTTGAATGGAAGAGAAGGCTCCACCGGAACCGGATCGGGTTCTCGGCGAATTTTCTCTGCCATTGCCGGAGAAAATTTAGTTGGTCGTAGCAGCAGTGAATCTACCAGTTCATCTTACTCTTCTTCCTCTTCTGCTTCCCCGGATCGCTCTCATTCCATTAGTCTCTCTCCTCCAGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCTGAAAATACCGTAGCTCACCATTCTCCACCGCCACCTCCAGCGGCGATTAGAAGATCGCCGTCCTTGTCCACACTGTCGTCGCCTTCGCCGAGTTTCGGGCAGCACATGCCGTCGTCGTCTTCAATGTCGTCGACGCCGGAGCGCAGGGAGTGTCAGTCGCCATCGCTGTCTCCGCTTTCTCTGTCGCCGAGGAAAAACCCAAACCCAAACCCAGATGGTGAATCATCCCCAGGACTTGTTTTACTTGAAAAGACGCAATCTTTTGGCTCGTCTAAGTCCAAAAGCGACATTGGGTCACCGAGATTGTCCAATGCTTCTTCCATTGGAAAGTCCTCGGCGTTTTCTCTGCCGTCGCCGGATAAAGGGATGAACTTGCATCATGGGTTGGATCAGTCTCCGACCATTTCTGATGTTTCAGATCGGTTTAGACATTCTCCTCTGTCATCATTACATTTGTCACCGACATTACTTTCATCGCCGGAGAGGGAGTTGAGCCCTCAGGCTCCGTCTCAGGCACAGCCTCAGCCTCAGCTACAGCCACTGCCTCAGCCTCAGCCACAGCCTCAGCATCAGCCTCTGCCTCAACCTCAACCTCAATCTCAACCTCAACCTCAACTGCCACCTTCACGTAAACACTGGGAGATTCCTGACTTGTTGACACCAATCGGCGAAACACCGATTTTTTCAGCTCCTCAGAGGAAACAATGGGAAATTCCAGTTCTTTCGCTACCAATTGCTCCATCGAGTAGTAGTGTTTTAGCCCCTGCTCCACCGCCGCCGCCGCCACCACCTCCGCCAGTTCCGCGGCAACGTAAGCAGTGGGAGATGCCAGTGCCTTCTCCCGTGACGCCAGTGGGTCAACAGGTTTCGAGGCCGCCTGCACTGACACCTCCTTCCAGGCCTTTTGTGTTGCAAACCCCAAATACAATGGTTTCCCCGGTGGAGTTGCCACCTGTTAGTTCCCAGAATTTCGAGGAGAGCTCTGAGGAGTCATCTAAACCTAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCAAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATCGAAACTTTGTTTGTAGTGAATACGCCAAACCCAAAACCTAAGGACACGACTCCTCGCTCGGTTCTTGCCCCGCAAAATCAAGAGGATAGGGTGCTGGATCCTAAGAAGTCCCAGAACATTGCTATCTTGTTAAGAGCACTTAATGTGACTATAGAAGAAGTGTGTGAATCACTGTTAGAAGGTATCACTGATACACTTGGAACCGAACTGCTTGAAAGCTTGTTGAAAATGGCACCAAGCAAGGAGGAAGAACGCAAACTGAAGGAACATAAAGACGATTCTCCAACCAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGCGGTGCTTGATGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGCTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTGGAGGCCGTGCTCAAAACCGGCAACCGGATGAACGTGGGGACGAACCGAGGCGATGCACACGCATTCAAACTCGATACACTTCTCAAGCTCGTTGATGTCAAAGGCGCAGATGGCAAAACCACTCTACTCCACTTTGTGGTACAAGAAATCATCAGAACGGAAGGCGCTCGTCTCTCAGGCGCCAACCAAACAGTGGGCTCAAATTCGAACGACGATGCCAAGTGTAGAAGGCTCGGCCTGCAAGTAGTGTCTAGTCTGAGCTCCGACCTGGCGAATGTGAAGAAGGCAGCAGCAATGGACTCTGAAGTGCTAAGCAGCGAGGTGTCGAAACTCTCGAAAGGAATGGCACACATTGCAGAGGTGTTGCAGTTGAACGAAGCAGCAGGGTCAGACGAAAGCAAGCAGAAGTTCAGAGAGTCAATGAACAGGTTCACAAGAATGGCTGAGGAGGAGATACTAAAAGTGCAAGCACAAGAAAGTGTGGCTTTGTCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCAAAGGAAGAAGCTCATCCGTTTAGAATCTTCATGGTGGTGAGAGACTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGGATGATAAACGAGAGAACGATGGTTAGTTCTGCACATAGATTCCCTGTCCCTGTGAATCCTATGCTACCACAACCTCTTCCTGGTCTTGTCGGAAAGAGACAGTACAATTCCTCAGATGATGATAGTCCATCTCCTTAG 3363 0.5138 MREIKEHRTMWSRRSSSFIFTLFLLIGPISCLSSSTSINRRILHQPFQPEGGSPPPSVPPNPPPQPSPSPSPPNPKYPFSTTPTTNASTPFFPTYPSPPPPPSPSAFASFPANISSLILPQSSKSKSSSKKLVAVAISAVACALAVVALSAFVYCRRRRQSYSTDEKTLRSDSSIRLFPREASVATGGGRKPRNTSSTSSEFLYLGTIVNSRGGGVDELSEPHVAALNPRKMDSPELQPLPPLARQSSRLREETAATVEDDEEEFYSPRGSLNGREGSTGTGSGSRRIFSAIAGENLVGRSSSESTSSSYSSSSSASPDRSHSISLSPPVSISPRRSQPKSPENTVAHHSPPPPPAAIRRSPSLSTLSSPSPSFGQHMPSSSSMSSTPERRECQSPSLSPLSLSPRKNPNPNPDGESSPGLVLLEKTQSFGSSKSKSDIGSPRLSNASSIGKSSAFSLPSPDKGMNLHHGLDQSPTISDVSDRFRHSPLSSLHLSPTLLSSPERELSPQAPSQAQPQPQLQPLPQPQPQPQHQPLPQPQPQSQPQPQLPPSRKHWEIPDLLTPIGETPIFSAPQRKQWEIPVLSLPIAPSSSSVLAPAPPPPPPPPPPVPRQRKQWEMPVPSPVTPVGQQVSRPPALTPPSRPFVLQTPNTMVSPVELPPVSSQNFEESSEESSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCESLLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIVNFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGANQTVGSNSNDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLSSEVSKLSKGMAHIAEVLQLNEAAGSDESKQKFRESMNRFTRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDSPSP* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0467 1120 Gene3D Formin, FH2 domain 662 1076 IPR042201 -
Vra9g0467 1120 PANTHER FORMIN-RELATED 19 1120 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra9g0467 1120 SUPERFAMILY Formin homology 2 domain (FH2 domain) 599 1079 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 422 460 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 296 345 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 655 678 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 515 547 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 252 269 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 1100 1120 - -
Vra9g0467 1120 SMART it6_source 668 1082 IPR015425 -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 361 415 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 593 614 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 589 642 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 272 286 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 49 79 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 471 514 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 655 669 - -
Vra9g0467 1120 ProSiteProfiles Formin homology-2 (FH2) domain profile. 668 1093 IPR015425 -
Vra9g0467 1120 Pfam Formin Homology 2 Domain 670 1067 IPR015425 -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 229 568 - -
Vra9g0467 1120 PANTHER FORMIN-LIKE PROTEIN 1 19 1120 - -
Vra9g0467 1120 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0467 Vra-Chr9 4629354 4634153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0467 39 342 FH2 protein (formin) Gene Family AT3G25500 44.201 4.50e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0467 - - var:108322602 1697.56