Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0466 ATGGATTTATTTTTGACCAAAACCAGAGTTATGGAACAATTTAGGCAAATTGGGGAGGCACTGGGGGCTTTGAAATCTGTGATGGTATTCCGGGAGAACATTCAAATAAATCAGAGGCAATGTTCTCTGCTTTTTGATGTGTTCAATTCTGCATATGAGTGTATTGCAGATGAGATTACACAGAACCTGCAATTTGAAGAGAAGAATGTGAAGTGGAAGATTTTAGAGCAACCCCTGAGAGAGATCCATAAAATTTTCAGAGAAGGTGAAACTTACATTAGGCAATGCATGGAAACAAAGGACTGGTGGGCAAAAGCCATTACCTTATGCCACAACACAGATTGTGTTGAGTTTCATATACACAATTTGCTTTGTTGCATGCCAGTAGTAATTGAAGCTATAGAGTCTGCAGGAGAAACATCAGGGTTGGATCAAGAGGAGATGCAAAGGAAGAAGTACATAAACTCTAACAAATACAAGAAAGAGTATAGAGACATGAAGCTTTTCCAGTGGAAATTTGGGAAGCAGTACCTCGTCACTCAGGACTTATGCAACCGTTATGATAGTGTTTGGAAGGAAGATAGATGGTTTCTTTACAACAAACTCCTAGAAAAGAAAGTGGAAGGTGTGACAAAGTATGAGAAGAAATTGATAGATTTGCTTCTGAGAAATTTGGAAATGGCAGAATCAGTAGCAGGGAGGCTCCTTCCAAGCTCAATATTGGTTGGGTCTAAGGACTTTCAGGTAAGGAGAAGAATGGGGAATGCGAGTCAGTACAAGGAGATTTCATGGTTAGGTGAAAGCTTTGTGATAAGACATTTTACTGGGGACATTGAAGCTTTGCAACCTGAGATCATAGAACTTTTATCTCTTTCCCATCCAAATATAATGGACTGCCATGGTGGTTTTACCGATGAGGAGAAGAAAGAATGCTTTTTGCTAATGGAACTCATGAGCAAAACCCTTTCCACCCACATCAAAGAGATTCACTGTCCAAGAAGGCGAATACCATTCTCGCTTCTCGTAGCAGTTGATATCATGCTTCAGATTTCCAGGGGAATGGAGTATTTGCATTCAAAGAAAGTATATCATGGAGAACTAAACCCTTCAAGCATTCTTGTTAAGCCTAGAAGTGCATCCCCAGAGGGTTACTTGCACGCCAAGGTAACTGGATTTGGACTAACTTCTGTCAAGGATTTGAATCAAAAAGGGAACACAAATCAGAATGGAACTCCCCCATTCATCTGGTACTCTCCTGAAGTACTTGAGCAGGAAAACTCAGGGGGCACACCAAACTCCAAGTACACAGAGAAATCTGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGAAAAGTCCCTTTTGAAGATAGTCATCTCCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTCCCACTCAATTCACCAAAATATGTCATTAACTTGACAAAGAGATGTTGGCATATTGATCGACATCAACGTCCAAGCTTTTCTACCATATGTAGAGTTCTTCGTCATATAAAAAGATTTCTTATTATGAATCCTGGTTATAGTAGTCAGCCAGAACAACCAGTGCCACCAATAGATTATTGTGATGTAGAGTCACTGCTTCTGAAGAAGTATCCTTCTTGGGGAAGTTCTGAACCAGCACCGGTATCAATAATCCCATTTCAAATGTTTTCCTATCAAGTTATAGAACGAGAAAAAATAACTTCATGCTTTAAGGATAATTCTGAGTCTGGAAGTGATGCTTCAGCCTGTGGTGATGAACTTGTTACCTCAGGAGATGAACCGTTTCCATCCACAGCTGAAAGGAAGTCTTTGCTTGGAAATGATATTATGAACAGAAAAATTATTATGTCCAGGAAATCTCTTGATTTGAAGCTCATCAAACAACCAGGCACATCGAAAGGGAGATCAGCAAGACCTCCACAAATGTCCCCTCGTGCAAGAAGTATGAGAATTACATCAGAGCACCGTATATCAAGTCCAAGGGCGATGAGAAGAGTATCTTCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 2073 0.4042 MDLFLTKTRVMEQFRQIGEALGALKSVMVFRENIQINQRQCSLLFDVFNSAYECIADEITQNLQFEEKNVKWKILEQPLREIHKIFREGETYIRQCMETKDWWAKAITLCHNTDCVEFHIHNLLCCMPVVIEAIESAGETSGLDQEEMQRKKYINSNKYKKEYRDMKLFQWKFGKQYLVTQDLCNRYDSVWKEDRWFLYNKLLEKKVEGVTKYEKKLIDLLLRNLEMAESVAGRLLPSSILVGSKDFQVRRRMGNASQYKEISWLGESFVIRHFTGDIEALQPEIIELLSLSHPNIMDCHGGFTDEEKKECFLLMELMSKTLSTHIKEIHCPRRRIPFSLLVAVDIMLQISRGMEYLHSKKVYHGELNPSSILVKPRSASPEGYLHAKVTGFGLTSVKDLNQKGNTNQNGTPPFIWYSPEVLEQENSGGTPNSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHIDRHQRPSFSTICRVLRHIKRFLIMNPGYSSQPEQPVPPIDYCDVESLLLKKYPSWGSSEPAPVSIIPFQMFSYQVIEREKITSCFKDNSESGSDASACGDELVTSGDEPFPSTAERKSLLGNDIMNRKIIMSRKSLDLKLIKQPGTSKGRSARPPQMSPRARSMRITSEHRISSPRAMRRVSSGHVSDSELS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0466 690 Gene3D Transferase(Phosphotransferase) domain 1 265 524 - -
Vra9g0466 690 SUPERFAMILY Protein kinase-like (PK-like) 269 525 IPR011009 -
Vra9g0466 690 MobiDBLite consensus disorder prediction 638 690 - -
Vra9g0466 690 MobiDBLite consensus disorder prediction 585 613 - -
Vra9g0466 690 PANTHER SERINE-THREONINE PROTEIN KINASE 11 641 - -
Vra9g0466 690 Pfam Protein of unknown function (DUF1221) 31 244 IPR010632 -
Vra9g0466 690 ProSiteProfiles Protein kinase domain profile. 236 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0466 690 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 11 641 - -
Vra9g0466 690 Pfam Protein tyrosine and serine/threonine kinase 279 512 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0466 Vra-Chr9 4623007 4626731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0466 277 519 MAP Kinase Kinase Kinase AT3G50720 31.967 7.99e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vra9g0466 PK_Tyr_Ser-Thr 8.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0466 - - gmx:100813704 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0466 9 4623007 4626731 Vra9g0466 9 4623007 4626731 ECH