Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0447 ATGGGATACTTATCACAACCATCAGAACATTCAAACATGAAACCAATCTCACTTGCAAAGATGGACGACAATGAAGAATTATGTTCTTATGCTTCCTGGCTAGAAAAGCATCCTTCTGTCTTGGACAATTTTGATAAAGTGATGAGCGTTGCTGAAGGGAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACACTCTCACCGATTGTAGATGACCCTGATAAAGCTTACATGAGTGATGCTATGCGTGCAGCTGTACGTGAAGTTGCTTATTGTTTTCCCACAGCCATTGTTAGTGGAAGGCGTAAGGATAAGGTGTATGAATTTGTGAAGTTAAGGAATGTTTACTATGCTGGAAGTCATGGTATGGATATATCAACTCCATCAGGGTCTTCAAAATGTGAAGATCAGAGGCATCAGATAAAGGGTGTTGATGAAAAGGGTAATCATGTTGTTCACTTTCATCCCGCAAAAGATTTTTTGCCAACCATTCAAGAGATAATTAAGGTTTTGAAAGAAAACACAAGAAGAATAAAGGGCTCTATGATTGAGGATAACATGTTCTGTGTCACTGTACACTACCGGTGTGTGAAAAATGAAGAGGATATTAGTGTTCTGAGAGAAATGGTGGAGTCCACAATGAAATCTTACCCCAATTTCCACATATCAAGTGGAAGAAAGGTTATGGAGATACGTCCGAATGTAAACTGGGACAAAGGGTGTGCTCTTATGTATTTGCTTGACACTCTTGGCTTTGACAACTTCAACAATGTTCTTCCTATCTACCTCGGTGATGATAGAACTGATGAAGATGCTTTTAAGGTTATAAGACACATTGGACAAGGTTTTCCTATTGTTGTTTCTTCCATTGCAAAGAAGACTCAGGCTTCATATTCCTTGCGTGATCCTTCTGATGTGCTGGCTTTCTTGATTCGTTTAGCAAGATGGAAGAAGAACATGTTACAAAAACTTAAGTAA 978 0.3875 MGYLSQPSEHSNMKPISLAKMDDNEELCSYASWLEKHPSVLDNFDKVMSVAEGKEIVVFLDYDGTLSPIVDDPDKAYMSDAMRAAVREVAYCFPTAIVSGRRKDKVYEFVKLRNVYYAGSHGMDISTPSGSSKCEDQRHQIKGVDEKGNHVVHFHPAKDFLPTIQEIIKVLKENTRRIKGSMIEDNMFCVTVHYRCVKNEEDISVLREMVESTMKSYPNFHISSGRKVMEIRPNVNWDKGCALMYLLDTLGFDNFNNVLPIYLGDDRTDEDAFKVIRHIGQGFPIVVSSIAKKTQASYSLRDPSDVLAFLIRLARWKKNMLQKLK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0447 325 TIGRFAM T6PP: trehalose-phosphatase 54 314 IPR003337 GO:0003824|GO:0005992
Vra9g0447 325 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 58 280 IPR006379 -
Vra9g0447 325 SUPERFAMILY HAD-like 57 319 IPR036412 -
Vra9g0447 325 CDD HAD_TPP 57 308 - -
Vra9g0447 325 Gene3D - 156 324 IPR023214 -
Vra9g0447 325 Gene3D - 56 154 IPR023214 -
Vra9g0447 325 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 13 324 IPR044651 GO:0004805|GO:0005992
Vra9g0447 325 Pfam Trehalose-phosphatase 59 304 IPR003337 GO:0003824|GO:0005992
Vra9g0447 325 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 13 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0447 Vra-Chr9 4308230 4314279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0447 38 314 Trehalose Biosynthesis Gene Families AT1G06410 23.891 2.53e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0447 K01087 - gmx:100799466 516.538