Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0443 ATGAAAGACATACAAGGTTACCTTGCTCTATTCTTCCTGTGGCTCTTTTCCACCATTTTTATTCGTTCAATCTTCAAAAAATCACACAAACTCCCACCTGGCCCTCCCATCTCAATACCCTTACTAGGGCACGCGCCCTATCTCCGTTCGGTGCTTCACCAAGCACTCTACAAACTCTCCCTACGCTATGGTCCCTTGATTCATATCAAGATCGGCTACAAAAATATCGTTGTAGCGTCGTCTGCGGAGACTGCCAAAGAGATCCTTAAAACCTCCGAAGAGGCGTTCTGCAACCGCCCCTTAATGATTGCCAGCGAGAATTTAACTTACGGTGCCGCCGATTACTTTTTCATTCAGTATGGTACCTACTGGCGCTTCCTGAAGAAGCTCTGCATGACGGAGCTTCTGAGCGGGAAGACTCTGGAGCATTTTGTGGGCATTCGTGAGAGTGAGGTGGAAGCATTTTTGAAGCGGATGTTGGAGATGTCGGCGACGGGGAAGGAGGTGGTGATGAGGCAAGAGCTGATAATGCACACGAATAACATTATCACGAGGATGATCATGGGAAAGAAGAGCAGTGGTGTGGATGATTTTGTGGCGCAGTTGAGGAAGGTGGCGAGGGAAGTGGGGGAGTTGCTGGGTGCATTCAACTTGGGAGATATTTTGGGGTTTGTGAAACCTTTTGATCTGCAGGGATATGGGAAGAAGAACATGGAAACGCACCGCAAGGTTGATATGATGATGGAGAAGGTGCTGAAGGAGCACGAAGAGGCGAGGGCCAAAACAGGTGCTGACAGTGATAGGAAGAAAGATCTCTTCGACATTCTCTTGGACCTCATTGAAGCTGATGGTGCTGACAATAAACTCACAAGGGAAAGTGCCAAAGCCTTTGCTCTGGACATGTTCATCGCCGGCACAAACGGACCTGCTAGTGTTCTGGAATGGTCCCTCGCGGAGCTGGTGCGAAACCCAGAGGTGTTGAAGAAGGCGAGAGAGGAGATAGAGCGTGTGGTGGGAAAGGAGAGGCTGGTGAAGGAGTCAGACATTCCTAACCTCCCTTATCTGCAAGCAGTGGTGAAGGAGACTCTGAGATTGCACCCTCCGACCCCAATCTTCGCGCGAGAAGCCATGCGCACGTGCCAGGTTGATGGCTACGACATTCCTGCGCACTCCACCATCATGATCAGCACGTGGGCCATCGGCAGAGACCCCAAATACTGGGACAACCCACTGGAGTACAACCCAGAGAGATTTTTGGTTTCCGATGAGCTCGGAAAAGGCAAAATCGACGTGAGGGGACAGTACTATCAGCTTCTACCCTTTGGAAGCGGACGAAGAAGCTGCCCCGGAGCCTCACTTGCGTTACTCGTCATGCAAGGCACACTTGCGAGTTTGATACAGTGCTTTGATTGGGTGGTGAATGATGGGAAGAGTCACGACGTTGACATGACGGAGGAGGGAAGAGTGACGGTGTTTTTGGAAAAGCCGCTTACCTGCAAGCCTGTTCCCCTGTTTACTCCCTTCGCTGCATGA 1533 0.5082 MKDIQGYLALFFLWLFSTIFIRSIFKKSHKLPPGPPISIPLLGHAPYLRSVLHQALYKLSLRYGPLIHIKIGYKNIVVASSAETAKEILKTSEEAFCNRPLMIASENLTYGAADYFFIQYGTYWRFLKKLCMTELLSGKTLEHFVGIRESEVEAFLKRMLEMSATGKEVVMRQELIMHTNNIITRMIMGKKSSGVDDFVAQLRKVAREVGELLGAFNLGDILGFVKPFDLQGYGKKNMETHRKVDMMMEKVLKEHEEARAKTGADSDRKKDLFDILLDLIEADGADNKLTRESAKAFALDMFIAGTNGPASVLEWSLAELVRNPEVLKKAREEIERVVGKERLVKESDIPNLPYLQAVVKETLRLHPPTPIFAREAMRTCQVDGYDIPAHSTIMISTWAIGRDPKYWDNPLEYNPERFLVSDELGKGKIDVRGQYYQLLPFGSGRRSCPGASLALLVMQGTLASLIQCFDWVVNDGKSHDVDMTEEGRVTVFLEKPLTCKPVPLFTPFAA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0443 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vra9g0443 510 PANTHER BETA-AMYRIN 24-HYDROXYLASE 2 509 - -
Vra9g0443 510 Pfam Cytochrome P450 32 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 509 - -
Vra9g0443 510 SUPERFAMILY Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0443 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0443 Vra-Chr9 4255463 4257295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0443 1 502 Cytochrome P450 AT5G06900 40.711 6.08e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0443 K24188 K15814 gmx:100037459 864.759