Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0425 ATGGCAGTTGCAACATCTGGTGCTGTGTTAAACAGGTTTGGATCTCAGTTCTTGTGTGGAGGAAAGAGGAGTCAGGCACTGCTTGCTGCTGGCATTGGAGCCAAAGTTGGTGCTGCTGTTAGTCCTAAAAGACTCATTGTAGCAGTTGCTGCTGCTCCAAAGAAGTCATGGATCCCTGCTGTAAAAGGTGGTGGGAATTTCATTGACCCAGAATGGCTTGATGGCTCGCTACCAGGTGACTATGGTTTTGACCCTCTGGGACTGGGGAAAGACCCAGCATTTCTGAAATGGTATAGAGAAGCTGAACTGATTCATGGGAGGTGGGCGATGGCTGCAGTTGTAGGCATCTTTATTGGGCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGATCCTAATGCAGTTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGCACCCAGTTGCTTCTAATGGGATGGGTTGAGAGCAAGAGATGGGTGGATTTCTTCAACCCAGATTCTCAGTCAGTGGAATGGGCTACCCCGTGGTCAAAAACTGCTGAGAATTTTGGCAACTCCACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCTTTGGGATTTGCTGGCACAATCAAGGATGGTGTTTACATTCCTGATGCAGACAAGCTACAGAGACTGAAATTGGCTGAGATAAAGCATGCCAGGATTGCAATGTTGGCCATGCTGATTTTTTACTTTGAGGCTGGACAGGGCAAGACTCCCCTTGGTGCTCTTGGCTTGTAA 777 0.4878 MAVATSGAVLNRFGSQFLCGGKRSQALLAAGIGAKVGAAVSPKRLIVAVAAAPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGVPWFEAGADPNAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFGNSTGDQGYPGGKFFDPLGFAGTIKDGVYIPDADKLQRLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0425 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
Vra9g0425 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Vra9g0425 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Vra9g0425 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Vra9g0425 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0425 Vra-Chr9 4040963 4042243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0425 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 82.239 1.16e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0425 K08917 - gmx:100783223 501.516