Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0414 ATGGCGAACCCTAAAACCAAGAGTCTTCATTCGCTGGGGGGCGAGGGCGATCCCGAATCATACGAATCGCGGTGGGTTTTCCAGGAGGACGAGGATCCCTCCGAGATCGAGGACTTCGACGCTGCGGATTTACGCCACCAGCCTATGTTTGATTCTGAGGACGAGGACAATGGCGAACATAGACTCGTTCGCACCGGTCCGCGAATCGATTCATTTGATGTCGAAGCTCTCGAGGTCCCCGGCGCTCAGAGAAATGACTACGAGGATGTTAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGACGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCTGTTAATGGAAATGAAGATATTCTTGGAGCTTTATCACTTGTTTTGTACACTTTAATTTTGATTCCTTTACTGAAGTATGTGCTTGTTGTTCTTTGGGCCAATGATGATGGGGAAGGTGGTACGTTTGCATTGTACTCGTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCTCGAATATCGGGCTTTAGACTGAAGGTGCCATCTCCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTAGAGAATTCGCTGACTCTTAAGAAGATTATACTATTATTAGTTCTTGCTGGTATTTCCATGGTCATAGCTAATGGGGTGGTTACGCCGGCAATGTCAGTGCTATCATCTGTTAATGGTTTGAAGGTTGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTATCGTTTTATTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGGCTTGTTGTAGGGCCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATACAACCTTGTTAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGCTCGGAGGCAATGTTTGCAGATCTTTGCTATTTCCCTGTACGGTCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTAATGTTGGGATATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGCAATGCTTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACATTCCTCATTGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGACAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGTTTGTCTGTACTATATCCAGCCTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGTGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATTCACATCATTGTAGTGCTGATTTTTGCAGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGGAGTTGGATCATATTGGTCTTTGCTGTATTAATGTTTTTTATAATGTTTGTATGGAATTATGGGAGCAAGCTCAAATATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATGCGAGAATTAGGCTGTAATCTTGGGACAATACGAGCTCCTGGAATCGGTTTGCTCTATAATGAGTTGGTGAAAGGAATTCCAGGCATTTTTGGCCATTTTCTAACCACACTTCCAGCTATACACTCTATGATTATATTAGTGAGTATTAAATATGTTCCAGTTCCTATGGTTCCTCAGAGTGAAAGGTTTCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGCATTGCCAGGTATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAACTGTTGATGGAAAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTGGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCTCTTGGCGTCCCTCTTCTGGCTGATTTTATTGATACAAACATACCCATACCCAATTTGGAAGCAAGCACATCTGAGGATGCAAACCCTGAATCTCCTAAGCCCCCAGTGCTTGATGCTGAGCAGAGTCTTGAGAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTTGGTCATGGGGATATAAGGGCTAGGAAAGACTCATGGTTTATCAAGAAGCTAATTATAAATTATTTTTATTCTTTTCTGAGAAAGAACTGCCGGAGGGGGATCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTAA 2541 0.4219 MANPKTKSLHSLGGEGDPESYESRWVFQEDEDPSEIEDFDAADLRHQPMFDSEDEDNGEHRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPVNGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSPELERSLKIKERLENSLTLKKIILLLVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLIVLFSVQKYGTSKVGLVVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFPVRSVQLTFVFLVLPCLMLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSLDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLIFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVLMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIILVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGSRVLIAPNGSVYSLGVPLLADFIDTNIPIPNLEASTSEDANPESPKPPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0414 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 7 845 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra9g0414 846 MobiDBLite consensus disorder prediction 698 717 - -
Vra9g0414 846 PANTHER POTASSIUM TRANSPORTER 7 845 - -
Vra9g0414 846 MobiDBLite consensus disorder prediction 1 33 - -
Vra9g0414 846 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra9g0414 846 TIGRFAM kup: potassium uptake protein 98 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0414 Vra-Chr9 3809506 3820432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0414 11 846 Inorganic Solute Cotransporters AT5G09400 78.791 0.0 1312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0414 - - gmx:100803841 1558.89