Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0412 ATGGATTCTGCATTCTCCGTCACCACGACGGCACACATGGCGCTTTTCAGAGTGCACCACCGTCATTTTGCCGGCGCTCCTCAACGCGCCTTCGTCCGCCGCAACCTCAGATGCCTCGTTGCTTCCTACAACAACTGCTGCCGCATTCCATGTTCTTTTACTTCCGCACCGTCGCCGTCCTCGCTCCGCTGCTTCGGCGGATTGCTCCNGCGAAAGCCGTGCCGACTCCGCTGCATTTCGAGCTCCGCCGCTTCCTGTGCTTCTTCCACCGGCGGTGGAAATGGAGGCGGTGGAATCGGTGACAACGGCGGTTCTGGCGGTTCTGGCGGTGAGTCTGGTGATGCTAATCTCCAATTGGTTGGTGACGCGTCACAGGAGCTTTCGGCACTTTCGCCTGACGTTATCATTCTCGATGTTTCAGGAATGGTGTGCGGGGGATGTGCGGCGACTGTGAAAAGGATACTGGAAAATCGACCACAGGTGTCATCAGCTAGTGTAAATTTAACAACAGAAACAGCAATCGTTTGGCCTATATCTGAAGCAAAGAATGGACCAAATTGGCAAAAGCAATTAGGGGAGGCACTTGCAGAGCATTTAACCAGTTGTGGTTACAATTCTAGCCTCCGAGGTATTATTCATTCCTACCAGTTGAGCCAGCCATTATTGAGTCAATTCAGTGTCTTTTTATGTTTTTTTACCTTGGTATTTGCTTATTTTTCATAA 723 0.5104 MDSAFSVTTTAHMALFRVHHRHFAGAPQRAFVRRNLRCLVASYNNCCRIPCSFTSAPSPSSLRCFGGLLXRKPCRLRCISSSAASCASSTGGGNGGGGIGDNGGSGGSGGESGDANLQLVGDASQELSALSPDVIILDVSGMVCGGCAATVKRILENRPQVSSASVNLTTETAIVWPISEAKNGPNWQKQLGEALAEHLTSCGYNSSLRGIIHSYQLSQPLLSQFSVFLCFFTLVFAYFS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0412 240 CDD HMA 137 204 IPR006121 GO:0046872
Vra9g0412 240 SUPERFAMILY HMA, heavy metal-associated domain 135 181 IPR036163 GO:0046872
Vra9g0412 240 Pfam Heavy-metal-associated domain 137 176 IPR006121 GO:0046872
Vra9g0412 240 ProSitePatterns Heavy-metal-associated domain. 139 168 IPR017969 GO:0046872
Vra9g0412 240 Gene3D - 134 211 - -
Vra9g0412 240 MobiDBLite consensus disorder prediction 95 116 - -
Vra9g0412 240 ProSiteProfiles Heavy-metal-associated domain profile. 134 208 IPR006121 GO:0046872
Vra9g0412 240 PANTHER ATP7, ISOFORM B 118 207 - -
Vra9g0412 240 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 118 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0412 Vra-Chr9 3748329 3749941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0412 118 209 Primary Pumps ATPases AT4G33520 65.217 2.24e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0412 K17686 - vra:106773839 426.017