Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0383 ATGAAACTGACATTAAAATATGAAACATGTGTTGAATTAATACACAATATTCCATGTGATATGGATAGTTCAGAAGCAGTTTTGGAGCAAAGTGTGATGAACATTGAAGGCAGCAGAGTGGAAATGGAAGGTATCTTCTTGACATGGAAGGATGTATGGGTCACTGCTTCTAATAGAAAGAATGGAAGCAGATCAATTCTTGAGGGTCTCACTGGTTATGCTAAACCAGGGCAACTCTTGGCAATTATGGGTCCTTCTGGCTGTGGCAAATCTACACTACTTGATACTTTAGCAGGTAGATTAAGTTCAAAGATGAGGCAAAGTGGGGAGATTCTGATCAATGGTCACAAACAAAGATTGGCTTATGGAACCTCAGCATATGTGACACAAGATGATACCTTGATGACAACCTTAACGGTTGGAGAAGCTGTGCACTATTCAGCTCAACTTCAGTTACCTGACAGCATGTCGAAACAAGAGAAGAAAGAGAGAGCAGATTTTACAATCAGAGAAATGGGTCTTCAAAATGCCATTAACACAAGAATTGGAGGATGGGGTGTTAAAGGGATTAGTGGTGGTCAGAAAAGGAGAGTTAGCATCTGCATTGAGATTCTTACACGACCTAAACTTCTCTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCTTACTATGTCATCAAAAGAATCGCTTCCCTTGCTCAAAATGATCACACTAAGAGGACTGTTATAGCATCAATCCATCAACCTAGTACTGAAGTTTTTCAACTCTTCAATAACCTTTGTCTTTTGTCTTCTGGGAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAACTCAGTTTTTCGCTTCATATGGCTATCCTTGTCCCACTCTCATGAATCCGTCTGATCATTTACTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAGGTGGGTTTAGCAGGAACTACAAACTTGCCCACAGAAGAAGTAATTCACATCCTTGTGAACTCATACAAATGCTCTGAGAGGAATCAAGAACTTCAAAGTGAAGTAGCTTTACTATCTCAGAAGCAGAAAAGTTCGTTGGATGTGAAGAGATCACATGCTGGCTTCCTTAATCAGTGCTTTGCTCTTACCAAAAGATCGTTCGTCAACATGTTTCGTGATCTCGGCTATTATTGGTTGCGCCTTGTCATATATATTGCATTGGTTGGATTCCTCACTTTCATGACTATTGGTGGATTCCCTTCCTTTGTGGAAGTCATGAAGGTATTTCAACGAGAAAGAGAAAACGGGCATTATGGTGTCACTGCATTTGTGATTGCAAACACGTTATCATCAATCCCATTCTTGGTATTGGTTGCACTAATTCCTGGGGTTATAGCTTACTACCTTCCAGGTCTTCAGAATGGATTCGAACATTTCGTGTATTTCATTTGTGTTTTATTTTCTAGTTTGATGTTAGTGGAGAGTCTTATGATGATAGTTGCGAGCATTGTTCCGAACTTTCTGATGGGCATCATAACTGGTGCTGGAATTCAAGGAGTGATGCTTTTACTAAGTGGCTTCTTCAAGTTGCCAAACGATATTCCGAAGCCAGTTTGGAAATACCCTTTACACTACGTTGCTTTTCATACCTTTGCCAACCAAGGAATGTTCAAGAACGAGTATGAAGGACTAAGATTTGAAGCCGAAAATGATGGAGGAAGCTCACACAGTTACATCACTGGTGAAGAGGTTTTGAGAAATGTGTGGCAAGTTGACATGAGTTATTCAAAGTGGGTTAATCTTGCAATATTGCTGGGGATGATTGTTCTGTATCGAGTATTATTTTTGGTTATTATCAAGATTGAAGAGAAGATGAAGACCGTTGTTGTCCCACTTTCTTCCAAGAGATCAACACAAATCATGGAAAACCCCAACGCCACTCCTTCGCATTCACAAAATACTTTGTTTTAA 1953 0.3978 MKLTLKYETCVELIHNIPCDMDSSEAVLEQSVMNIEGSRVEMEGIFLTWKDVWVTASNRKNGSRSILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLSSKMRQSGEILINGHKQRLAYGTSAYVTQDDTLMTTLTVGEAVHYSAQLQLPDSMSKQEKKERADFTIREMGLQNAINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVIKRIASLAQNDHTKRTVIASIHQPSTEVFQLFNNLCLLSSGKTVYFGPASAATQFFASYGYPCPTLMNPSDHLLKTINKDFDQDIEVGLAGTTNLPTEEVIHILVNSYKCSERNQELQSEVALLSQKQKSSLDVKRSHAGFLNQCFALTKRSFVNMFRDLGYYWLRLVIYIALVGFLTFMTIGGFPSFVEVMKVFQRERENGHYGVTAFVIANTLSSIPFLVLVALIPGVIAYYLPGLQNGFEHFVYFICVLFSSLMLVESLMMIVASIVPNFLMGIITGAGIQGVMLLLSGFFKLPNDIPKPVWKYPLHYVAFHTFANQGMFKNEYEGLRFEAENDGGSSHSYITGEEVLRNVWQVDMSYSKWVNLAILLGMIVLYRVLFLVIIKIEEKMKTVVVPLSSKRSTQIMENPNATPSHSQNTLF* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0383 650 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524
Vra9g0383 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 402 643 - -
Vra9g0383 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 21 401 - -
Vra9g0383 650 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 21 401 - -
Vra9g0383 650 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 402 643 - -
Vra9g0383 650 Pfam ABC-2 type transporter 250 365 IPR043926 GO:0140359
Vra9g0383 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 291 IPR027417 -
Vra9g0383 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 293 IPR003439 GO:0005524
Vra9g0383 650 Pfam ABC transporter 69 218 IPR003439 GO:0005524
Vra9g0383 650 Pfam ABC-2 type transporter 400 555 IPR013525 GO:0016020|GO:0140359
Vra9g0383 650 SMART AAA_5 76 265 IPR003593 -
Vra9g0383 650 Gene3D - 47 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0383 Vra-Chr9 3280384 3283248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0383 66 254 Calmodulin-binding Proteins AT2G36910 29.744 1.76e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0383 K05681 - gmx:100794527 1012.29