Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0382 ATGGAGGAAGAGAACGACATAACAGTGACATGGGAGAATTTGCAGGCTAGAGTTGCCGGTGGAAAGAATAGAAAATTAATACTGAATGGTTTAACTGGTTATGCACAACCAGGGAAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAATCGACACTTCTTGATGCTTTAGCAGGAAGATTGGGATCGAACATAAAGCAAACGGGGAAGATTCTAATCAATGGCCTGAAGCAAGAACTGGCCTACGGAACATCAGGGTACGTGACACAAGACGATGCGATGCTGTCATGTTTAACAGCTGGAGAAACGTTGTACTACTCAGCTGAACTCCAATTTCCAAACAGCATGTCTATAACTGAGAAGAAGGAACGAGCAGATGCTACGCTGAGAGAAATGGGTCTGCAAGATGCGATCAACACAAGGGTTGGAGGGTGGAGTTGTAAAGGTCTGAGTGGGGGACAGAAACGGAGACTCAGCATATGCATTGAGATTCTAACACATCCCAGACTCCTCTTCCTTGATGAACCAACCAGTGGCCTTGATAGTGCAGCTTCCTTTTATGTTATGACTGGAATTGCAAGTCTCATTCTAAAGGATGGCATTCAAAGGACTATTGTGGCTTCCATCCACCAGCCTAGCAGTCAGGTTTTCCAACTTTTTCATCATCTTTGTCTTCTCTCTTCAGGAGAGACTGTGTATTTTGGACCAGCCTCTCATGCAAATCAGTTTTTCTCTTCCAATGGTTTTCCCTGCCCATCTCTCTACAATCCTTCAGATCATTACCTAAGGATCATAAACAAAGATTTCAATCAGGATGCCGACGAAGGAATTACCACTGAAGAAGCAACTAATATCCTTGTCAGTTCTTATAAATCGTCTGAATATAGTAATGACGTTCAGAATGAAATAGCAAAAATAAGTGTAAACGATTCTGGTGCAGTTGGAAGGAAGAAGATTCACGCTGCATTCCTTACTCAGTGTCTGGTTCTTCTGAAAAGATCTTCGAAGCAAATCTATCGTGATATAAGCAATTACTGGTTACGTCTGACTGTCTTTATAGCAGTATCTGTAAGCTTGGGCTCTATTTTCTATCACGTTGGTGCAAGTATGAGATCAATTCAGGAAAGAGGATCGCTGCTTTGTTTTTTCGTTTCGGTTCTGTGTTTCATGACACTTGTCGGTGGATTCTCGCCGTTAATAGAGGAAATGAAGGTGTTAAAGAGAGAGAGATTGAATGGACATTATGGTATAACAGCTTTTCTGGTAGGGAGCACATTTTCTGCTGTTCCTTACACACTACTGATATCTATCATTCCGGGAGCTATAGTTACTTATCTTTCTGGACTGCACAAAGGATTAGAGAACTTTGTATACTTTTCTTGTGTACTATTTGGTATTGTGATGTGGGTTGAGAGCCTGATGATGGTTGTTGGGAGCATTTTTCCAAATTTTGTTATGGGTGTGATCACTGCTGGTGGGGTTGAAGGAGTGATGATTTTGACAAGTGGATTCTACAGGCTGCCTAATGATCTTCCGAAACCNTTATGGAAATACCCTTTCTACCATGTTTCCTTCCTCAACTATGCTTTCCAAGGATTGTTAAAGAATGAATTTGAGGGATTAATGTTTGGTTCAGATGGCATAAGTCTTAGTGGTAGATATATTCTTTCAGAGACATGGCATGTGCAAATGGGTCATTCAAAGTGGTTTGATCTTTCTATCATGTTTGGTATGATTCTTCTCTATAGAGTTCTATTCTTGATCATCACTAAATGCAAGGAGAAATTCAAACATGTTCATGTTGGCACTAATGCTCCTCAAACAAAAGTTTTCTCCAGAACCAACATCACTGATCTTTAG 1863 0.409 MEEENDITVTWENLQARVAGGKNRKLILNGLTGYAQPGKLLAIMGPSGCGKSTLLDALAGRLGSNIKQTGKILINGLKQELAYGTSGYVTQDDAMLSCLTAGETLYYSAELQFPNSMSITEKKERADATLREMGLQDAINTRVGGWSCKGLSGGQKRRLSICIEILTHPRLLFLDEPTSGLDSAASFYVMTGIASLILKDGIQRTIVASIHQPSSQVFQLFHHLCLLSSGETVYFGPASHANQFFSSNGFPCPSLYNPSDHYLRIINKDFNQDADEGITTEEATNILVSSYKSSEYSNDVQNEIAKISVNDSGAVGRKKIHAAFLTQCLVLLKRSSKQIYRDISNYWLRLTVFIAVSVSLGSIFYHVGASMRSIQERGSLLCFFVSVLCFMTLVGGFSPLIEEMKVLKRERLNGHYGITAFLVGSTFSAVPYTLLISIIPGAIVTYLSGLHKGLENFVYFSCVLFGIVMWVESLMMVVGSIFPNFVMGVITAGGVEGVMILTSGFYRLPNDLPKPLWKYPFYHVSFLNYAFQGLLKNEFEGLMFGSDGISLSGRYILSETWHVQMGHSKWFDLSIMFGMILLYRVLFLIITKCKEKFKHVHVGTNAPQTKVFSRTNITDL* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0382 620 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524
Vra9g0382 620 Pfam ABC-2 type transporter 211 310 IPR043926 GO:0140359
Vra9g0382 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 245 IPR027417 -
Vra9g0382 620 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Vra9g0382 620 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 5 619 - -
Vra9g0382 620 Pfam ABC-2 type transporter 326 539 IPR013525 GO:0016020|GO:0140359
Vra9g0382 620 SMART AAA_5 37 226 IPR003593 -
Vra9g0382 620 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 254 IPR003439 GO:0005524
Vra9g0382 620 Gene3D - 1 248 IPR027417 -
Vra9g0382 620 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0382 Vra-Chr9 3250100 3253091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0382 27 240 Calmodulin-binding Proteins AT2G36910 25.792 1.79e-09 59.3