Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0374 ATGGTTAAGGCTGACAGCTCCCTGCCTTGCTCACACCATGTGGCTTGGCAATCACCTTCTTTGAATTACTTAAGCATGCTGCCTAAGCCCGGCTCACTTGGTCTCCCAACATATCTGAACTCAAGTACTTCCATCTTACCTCATGGGCTTGCAGCTCCTTCTATTCGAAGTCTGAAGACTGAGCTAACAAATGAAGTGCAAGGATACCTTAAGTATCACAACGGAGACACAAGTCTGAAAGAAATGCATCTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTTGCAAAAGAGGTTACTTATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGGCCTGTCTCTCCTCTTGTCCAGAGTCCAATTGTCACTACTAAGAAGATTGCTCAAAGTTATGACGTATATGGGGAGGAACAGGCTAGAATTATGGGTCAAAAGCATCTTGCCAGCTATGGTTTACTGAAAGAGTCTGTTAAGGATAATGTAGTTATTGAAGAAAGTGAAAAGCATGAAGATACGGAAGAAATAAATGCATTGCTTTATTCCGATGATGACAGCAGTGAATATGATGAGGATAATTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAACTACAAGGACTTATGCGATACAAGAACAATGTGAGGACTTGAAGGAGGAGGTTGCCAGCTCTTGTTGGCCTAAGAAAAAGATGAAGTTAATTACTGGTGGCGACAATAGGTCATCCCCACGTGTGGACCAAACTACTGTGGTACAACCAAATGAAACCTGTGATTATGTTAGTGATGCTGAATCAAAGAACTCCAGTGGTTGGACTTATTCTGTTGATAAAACTAAAGTAGATGATTCAGTGGTGTGTGATATCAAATTAAAAAAGGATAAGATCCGGGAATCTTTGACAGTTCTGGAGAATTTAATTCCTGGTGCAAAAGGAAAGGAGCCAATGTTAGTCATTGATGGAACTATTGAGTACTTGAAAGTTTTGATGTCCCAAACTGGTTCTCTTGGTGTAGAATATCACTAA 1038 0.4056 MVKADSSLPCSHHVAWQSPSLNYLSMLPKPGSLGLPTYLNSSTSILPHGLAAPSIRSLKTELTNEVQGYLKYHNGDTSLKEMHLGGALQNANPSLQKRLLIFDRSDNKTRLFYGPVSPLVQSPIVTTKKIAQSYDVYGEEQARIMGQKHLASYGLLKESVKDNVVIEESEKHEDTEEINALLYSDDDSSEYDEDNCDEVTSTDRSPLATTRTYAIQEQCEDLKEEVASSCWPKKKMKLITGGDNRSSPRVDQTTVVQPNETCDYVSDAESKNSSGWTYSVDKTKVDDSVVCDIKLKKDKIRESLTVLENLIPGAKGKEPMLVIDGTIEYLKVLMSQTGSLGVEYH* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0374 345 PANTHER TRANSCRIPTION FACTOR BHLH145 10 345 IPR037546 -
Vra9g0374 345 PANTHER TRANSCRIPTION FACTOR SAC51 10 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0374 Vra-Chr9 3167109 3170867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0374 85 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 34.559 5.48e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0374 - - gmx:100817942 506.908