Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0364 ATGGCCAAAGTGGGAAAACTTACAAAGCTGAAGTCAGCGATCAAGAGATGGCCCTCATTGACCAAGCTCAGCCGCGGCAACAGCTGTGTCTCCTCCCACAAAGGAGCCACCGGAACATCCTCGTCATCCAAGGAACATGCACATGACCAAGAGCTTCATGCTGTTTATGTTGGCAAATCTAGGAGGCGCTACCTCGTAAACTCCGAAGTGATCGACCACCCTGTGTTTCAGGAGCTAGTTGATAGGTCTTCTTCGTCTCATGATGATGGGGTGGTGGTATCCTGTGAGGTGGTGCTGTTCGAGCACTTGCTGTGGATGCTTGAGAGCGAAGAGACCCAGTTGGGGTCCATGGATGAGCTGGTCGAGTTTTACTCTTGTGCATGCTGA 387 0.5168 MAKVGKLTKLKSAIKRWPSLTKLSRGNSCVSSHKGATGTSSSSKEHAHDQELHAVYVGKSRRRYLVNSEVIDHPVFQELVDRSSSSHDDGVVVSCEVVLFEHLLWMLESEETQLGSMDELVEFYSCAC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0364 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 126 IPR003676 GO:0009733
Vra9g0364 128 MobiDBLite consensus disorder prediction 24 43 - -
Vra9g0364 128 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 126 - -
Vra9g0364 128 Pfam Auxin responsive protein 16 107 IPR003676 GO:0009733
Vra9g0364 128 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0364 Vra-Chr9 3057091 3058087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0364 54 122 Calmodulin-binding Proteins AT3G43120 28.767 2.64e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0364 - - gmx:100797158 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0364 9 3057091 3058087 Vra9g0364 9 3057091 3058087 ECH