Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0348 ATGTCAAGTTTCCCCAACACAGTGTCGGAAGGCCGGAGGTTTGGCAAGGCGCCGGAAAAATCCTCTTTTTCTCAGACTTGCAGTCTCTTGAGCCAGTTCTTGAAGGAGAAACGAGCTTCTGGTGATTCCACCCATGGAATGGGTGGGAAAATGGAACCCAAAGCTAGTACGAAGGATTTGTTTGGCAGCCTGCAAAACTCAGATGGGGCGTTGAAACTAAGAGCTTCTGCCATGGATTTTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGCCTAATCTTAGATCAGCGGTTCCTGAATCTCCTCAAATGACAATATTCTATGCTGGAAAAATGTTGGTATTCGATGGTTTTCCTCCGGAGAAGGCAACAGAGGTGATGGAGTTGGCCACCAAGCTGGCGTTGGACAGTTCCGGAGCCGAAGAAACTCCCCCTAGTGCTCCGGTTACCACCAAAGAATTGGCTGAGACCAAAGTGCCTCAGACAAACACCTCAGAAGCCCCTAAGCCAGGAAGCCAAGGGGTTGGTTCAGATATGAGGTACCCAAGAAGAGCTTCACTTTTAAAATTTCTTGAGAAAAGAAAAGAAAGGGTTAATGCGAGAGGGCCTTATCAACTGAACAATCAGAAACCAGAAGGAAGCAGTTCAGGTGGTGATCCTGAAGATCAGTGTTCTAAACAGTTTGACCTTAACTTGTAG 702 0.4715 MSSFPNTVSEGRRFGKAPEKSSFSQTCSLLSQFLKEKRASGDSTHGMGGKMEPKASTKDLFGSLQNSDGALKLRASAMDFLPQLVENPCIKKPNLRSAVPESPQMTIFYAGKMLVFDGFPPEKATEVMELATKLALDSSGAEETPPSAPVTTKELAETKVPQTNTSEAPKPGSQGVGSDMRYPRRASLLKFLEKRKERVNARGPYQLNNQKPEGSSSGGDPEDQCSKQFDLNL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0348 233 MobiDBLite consensus disorder prediction 136 233 - -
Vra9g0348 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 227 IPR040390 -
Vra9g0348 233 MobiDBLite consensus disorder prediction 156 172 - -
Vra9g0348 233 Pfam Jas motif 184 206 IPR018467 -
Vra9g0348 233 Pfam tify domain 100 131 IPR010399 -
Vra9g0348 233 MobiDBLite consensus disorder prediction 186 201 - -
Vra9g0348 233 MobiDBLite consensus disorder prediction 1 22 - -
Vra9g0348 233 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Vra9g0348 233 MobiDBLite consensus disorder prediction 203 233 - -
Vra9g0348 233 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 9 227 - -
Vra9g0348 233 SMART tify_2 98 133 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0348 Vra-Chr9 2913101 2915405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0348 12 207 Tify Gene Family AT1G19180 36.726 1.33e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vra9g0348 tify 2.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0348 K13464 - gmx:100778559 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0348 9 2913101 2915405 Vra9g0348 9 2913101 2915405 ECH