Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0338 ATGTCTGCACCGATGATCATTGACCCTGTGGTGATATCGGCACCAGAAACTCAATCAGCAGCTAGCATACTAGTTGGACAAAGTGAAGTTGAATTTGCTGTGTGTGACTGTTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAAAGAATCAGGGAGAGGTACCATGGAAAATGGGTCTGTGGGTTGTGTGCTGAGGCTGTTAAGGATGAAATTGTGAGGTCTGAGAGGCTTGTCTGCACAGAAGAAGCAATGGCAAAGCATATGAACTTCTGCAAAAAGTTCAAGGCATCAGGGCCTCCTCCAAATCCAACAGTGCATTTGATATCTGCCATGAGACAAATTCTTAGAAGGAGTTTGGATTCTCCTAGAGTAAGGTCCACACCTAATAGTCCAACTAAGACTATCACAGAAATCCATGGTTCTGTGCTTGCAAGGTCTGAGAGCTGCTTCCCTACCCTCACTGAAGGATTGGGATGA 483 0.4555 MSAPMIIDPVVISAPETQSAASILVGQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVCTEEAMAKHMNFCKKFKASGPPPNPTVHLISAMRQILRRSLDSPRVRSTPNSPTKTITEIHGSVLARSESCFPTLTEGLG* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0338 160 PANTHER OS01G0745000 PROTEIN 17 155 IPR012876 -
Vra9g0338 160 Pfam Protein of unknown function (DUF1677) 30 119 IPR012876 -
Vra9g0338 160 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 17 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0338 Vra-Chr9 2794751 2796399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0338 - - gmx:100803697 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0338 9 2794751 2796399 Vra9g0338 9 2794751 2796399 ECH
Vra9g0338 9 2794751 2796399 Vra5g1335 5 20261071 20261809 ECH