Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0337 ATGAAAGCGCCAAATACCTTTTTTGATGCACAACATAGAAGTTTTCGTGGGCTTTTCAACTTTTTGTGTGTCGGGGTTTTGTTTTTCTTCTTTTACAATCGCGACGACATCATTCGCAACCCGATTCTCAGGCAATCCTCCTATTTTGTTAGCCACAAGTTGCCTCAAAATGCGATTTTAAGAGATGGGTCTTCTGTGATTCATCGTCGAATGGTTGAAATCGGTGCCAACACTTCAGGTGTTGCCGGTGAGAATGATTTAGGTGTGAGATATTCTGAATTCTGTTCTGGGTTGGTCCACCATGATGGTTATGCTAGTTCCTGTGAATTCTTAGAGGTTCATCCAGAGTGCTCTTCTGATGGATACCTTGATTACTTGAAATTTTTCTATTGTACATGTAAGGGTTTTAGAGTTTTTGGTTATCTAGGGTTGGGTGTATGGCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCTGCAGACTACTTTTGTCCTTCACTTGAGAGATTGTCAAGGCTCTTGAAATTGCCTCCAACCGTAGCTGGGGTTGTGTTGCTTCCACTTGGGAATGGAGCACCTGACGTGTTTGCTAGTATAGCTTCCTTTGTGGGTGCTGAAAGTGGTGAGGTTGGTCTTAACAGTGTGTTGGGTGGTGCTCTTTTTGTTACCACTATCGTTGTTGGAACTGTGTCGCTATGCGTTGCGGAGAAGGAGGTTGGAATTGATCGAAGATGCTTTATAAGGGATGTGAGTTTCTTTCTTCTGACTCTGTTTTCGCTGCTTATGATTTTGGTTATTGGTAAGGTGGGTGTTGGAGCGGCCATTGCTTTTGTATCCATTTATTTTGTGTATGCGTTCGTTGTTGCTGCCAATGAGATATTGAGGAAACATGCACAGAGATTGAAATTAGATGTTGTCACACCATTGCTTCCTGTCCAGGGAAGTGTGTTCTCTCTAGGCGTGGAAGATGACATTCCGATGTATAGCCCTTTGCTTGAAGACACTGAAAGCGATCCTCCCCGCCTTCCTCCATCGTTGCCACAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAATCAAACAAGCAAAATCAGCTTTTTGGATGATGAAAGTCCTCCCTGGGGATGGACTGATGGGTCTGGGGAGAACACCAGGGTGTCCTTCTCAGTTTCAAAACTTTTTCTGCTGATGGAGATTCCACTGGCTATTCCTAGGCGATTCACAATTCCAATGGTCAACGAAGAAGTATGGTCAAAACCTTATGCTGTCATCAGTGCTTCATTGTCTCCCATTCTCCTGGGCCTTTTGTTTAGCACCAGAGACAGTGTGAGTAATCAGGGTGTTATTCTTTCTTATTGTGTCGGTGTTGGTCTTGGATGTACATTTGGTGTTCTCGCTTATAAATACACAGTATCTGATCATCCACCACGTCAATTTTTGCTTGCTTGGGTACTTGGAGGATTCATCATGAGCATAGTGTGGTTCTACATAATAGCAAACGAGCTTGTGGCTCTATTGGTAGCATTTGGTGTAATTTTCGGAATTAACCCATCCATCTTGGGGTTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATATTGCATTGGCATTGGATGGAGAAGATGGAGTTCAGATTGCTATATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGCTTGGGAATCTCGCTGCTACTTGGGACCTGGTCTAAGAAACCCTCTTTGTACGTGGTGCCTAAAGATAGTAGCTTATTATACACCATGGGATTTTTGATCGCAGGACTGCTATATGCACTTGTTTTGCTACCTACCAAGAACATGCATCCTAACAGAACATTAGGAATGGGTCTCATCTCCCTTTATGTGATATTTCTTTCTTTCAGGATATGCACTGCAATGGGATTTCTAACAGTTGCTGGTTTAAGTTGA 1953 0.4291 MKAPNTFFDAQHRSFRGLFNFLCVGVLFFFFYNRDDIIRNPILRQSSYFVSHKLPQNAILRDGSSVIHRRMVEIGANTSGVAGENDLGVRYSEFCSGLVHHDGYASSCEFLEVHPECSSDGYLDYLKFFYCTCKGFRVFGYLGLGVWLAALFYLLGNTAADYFCPSLERLSRLLKLPPTVAGVVLLPLGNGAPDVFASIASFVGAESGEVGLNSVLGGALFVTTIVVGTVSLCVAEKEVGIDRRCFIRDVSFFLLTLFSLLMILVIGKVGVGAAIAFVSIYFVYAFVVAANEILRKHAQRLKLDVVTPLLPVQGSVFSLGVEDDIPMYSPLLEDTESDPPRLPPSLPQWMWSSNVAIYSNQTSKISFLDDESPPWGWTDGSGENTRVSFSVSKLFLLMEIPLAIPRRFTIPMVNEEVWSKPYAVISASLSPILLGLLFSTRDSVSNQGVILSYCVGVGLGCTFGVLAYKYTVSDHPPRQFLLAWVLGGFIMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNIALALDGEDGVQIAISGCYAGPMFNTLVGLGISLLLGTWSKKPSLYVVPKDSSLLYTMGFLIAGLLYALVLLPTKNMHPNRTLGMGLISLYVIFLSFRICTAMGFLTVAGLS* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0337 650 Pfam Sodium/calcium exchanger protein 485 637 IPR004837 GO:0016021|GO:0055085
Vra9g0337 650 Pfam Sodium/calcium exchanger protein 146 288 IPR004837 GO:0016021|GO:0055085
Vra9g0337 650 PANTHER CATION/CALCIUM EXCHANGER 4 10 645 - -
Vra9g0337 650 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 645 - -
Vra9g0337 650 Gene3D - 426 638 IPR044880 -
Vra9g0337 650 Gene3D - 176 309 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0337 Vra-Chr9 2787584 2790152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0337 92 644 Antiporters AT5G17860 40.901 5.02e-136 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0337 K13754 - gmx:100796101 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0337 9 2787584 2790152 Vra9g0337 9 2787584 2790152 ECH