Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0290 ATGTCAGACCCGAAGACCCGGACCCGAGCTTACGATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTCTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTTGAAGAGGCCCGCCGCAAGCGCCGCTCATGGGGCGAGAACCTCACCTTCTACACCGGATGCGGCTACCTGGCCGGAGCCCTTGGTGGTGCCGGCTCAGGACTCGTAGAGGGCGTCAGGGCCTTCGAATCCGGCGACACAACGAAGCTCCGAATCAACCGCGTCCTGAACGCGGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTCGGGATACTAGGGTTACTCTACGCCGGAATCGAGAGCGGAATCGAGGCGGCGAGAGACGCCGACGACGTATGGAACAGCGTCGCAGCGGGGCTCGGCACCGGCGCACTGTACCGGGCAGCGAGAGGGGTGAGATCAGCGGCGGTAGCCGGAGCGGTGGGGGGCGCTGTCGTGGGAGTGGCCGTGGCGGGGAAGCAAGCGTTGAAACGATATGTGCCTATATGA 537 0.6406 MSDPKTRTRAYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTGCGYLAGALGGAGSGLVEGVRAFESGDTTKLRINRVLNAAGHSGRVWGNRVGILGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGAVVGVAVAGKQALKRYVPI* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0290 178 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 7 178 - -
Vra9g0290 178 PANTHER TIM23 7 178 IPR045238 GO:0022857
Vra9g0290 178 Pfam Tim17/Tim22/Tim23/Pmp24 family 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0290 Vra-Chr9 2245376 2246351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0290 8 178 Chloroplast and Mitochondria Gene Families AT1G72750 68.966 7.85e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0290 K17794 - gmx:100777112 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2560 5 32385224 32387639 Vra9g0290 9 2245376 2246351 PCT