Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0274 | ATGACACGGGGGAGGATAAGGGCGAGGCTCCGGAGGAGCAATCTTTACACATTTGGTTGCCTTAAGCCTTCTACTCTTGAGGACACACCTCATCCACTTCAAGGTCCCGGGTTCTCGCGTACTGTGTATTGCAATCAGCCTCTTCTTCATGAAAGGAAGCCTCTATATTACTGCAGGAATGATATATCCACGACTAAGTACAATGTTCTTACATTTGTCCCCAAGGCACTCTTTGAACAATTCCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCGTGTCTCTCGGCCTCTCCAATTTCACCTTTTAGCCCACTGAGCATGATTGCTCCTTTGGCATTTGTTGTAGGGCTCAGTATGGCAAAGGAAGCATTGGAAGATTCTCGTAGGTTCCTTCAGGATGTCAAAGTTAATCGCCGAAAGGTTAATCGTCATAAAGGCGATGGTAAGTTTGGTCCCAGGTCGTGGCAGAACATTATGGTTGGGGATGTGGTAAAAGTGCAAAAGGATCAATTTTTTCCAGCTGATTTGCTTCTGTTGTCATCGAGTTATGAGGATGGGATATGCTATGTGGAGACTATGAATTTAGATGGTGAGACAAACTTGAAGGTGAAACGATCTTTGGAGTCTACCTTGAATCTAGACAATGACGAAGTTTTTAAAGATTTCACTGGAACAATACGTTGTGAAGACCCAAACCCGAATCTTTATACATTTGTTGGAAACTTAGAGTATGAGCGCCAGATTTATCCTCTTGATCCTAATCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGAGTACATCTATGGGGTGGCCATTTTCACTGGTCATGACAGCAAAGTCATGCAAAATTCTACAAAATCTCCTTCCAAACGAAGCACAATAGAAAAGAAGATGGATTATATTATATACACCCTATTCACTGTCCTTATTTTGATATCTGTTATTAGTTCCATAGGATTTGTCATCAAGACTAAGTACCAAACCCCAAGTTGGTGGTATTTACGGCCGGACAATATAGAATACCAGTATGATCCCAAGAAAATTGGAGTGGCTGGAATGAGTCATCTGATTACTGCGCTCATTCTTTATGGATATTTGATACCCATTTCACTTTATGTTTCCATCGAGGTTGTAAAGGTTTTGCAGGCTACCTTCATCAACCAAGACATTCAAATGTATGATGACGATACTGGAACTCCAGCTGATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCTTGTCAGATAAAACTGGAACTTTGACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTATTGCATATGGTGTGCGCCCCAGTGATGTTGAACTTGCTGCAGCAAAGCAAATGGCTTCTGATAGTGAGGAACCTGATTCAGATCTCTCCAATTTTCCCCTGCCTAAGGCTAAAGTGCGAGTTTCATGGGATGATGTTAAAAAAGATGAAGAAATTGGACTGGAGGCTGTTGTCACTTCCAAAGGTGACGAGGATCAAAAGCATGCCATAAAGGGATTTGGTTTCGAAGATGACCGTCTCATGAATTGTAATTGGTTGAAAGAGCCCAATGCTGACGACCTTTTGATGTTCTTCCGAATCCTAGCAGTTTGCCACACCGCCATTCCCGAGCTGAATGAGGAGACTGGTGTTTATACATATGAAGCTGAGTCACCCGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGCTTTGAGTTTTGCAGAAGGACTCAATCAAGTATTTTTGTTCGTGAAAAGTTTTCTGCTTCTAGACAAGTGGTTGAAAGAGAGTACAAACTTCTGAATCTGCTGGATTTTACTAGTAAAAGAAAACGTATGTCAGTGATCGTGCGTGATGAGGAGGGCACTGTCTTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGCATGTCAAAGAATGGAAAAAAGTATTTAGAGGCTACTACCAAGCATCTAAATGATTATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAAAGCTTGAGGAGCAAGAATACTCGGCTTGGAATAATGAATTTCAGAAAGCCAAAGCATCTGTTGGAGCTGAAAGAGATTCAATGCTTGAGCGAGTATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTTCCCCAATGTATTGATAATCTTGCTCAAGCTGGTCTTAAGATCTGGGTGTTGACAGGTGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCCGGTCACAGATACTGTACCCAGTGATGTCAAACAGTTCTTTTGTTTAACACCCCAGGCCATCAAGGATAACATTTCGAACCAACTCACCAATGCTTCCCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATACTTTAGAAGATGATATGAAGCACCAATTTTTGGCATTGGCAGTTGATTGTGCATCTGTCATCTGTTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTGAAACAAGGTACTAGAAAGACTACTCTAGCAATAGGTGATGGCGCAAATGATGTTGGGATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTGGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCGATTGCCCAATTTCGATTTCTAGAGAGGCTTCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATCGCACAAATGATATGTTATTTCTTCTACAAGAATATTACATTTGGCCTCACCATCTTCTATTTTGAGGCTTTCACAGGCTTCTCTGGTCAATCAGTTTATGACGACTGGTATATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTTATTTCACTCGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTGTATCAACAAGGACCCAGGAATTTATTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCCTCACTCATCATCTTCTTTCTTGTCGTCACCATCTTCTACGACCAAGCATTTCGTGGTGATGGCCAGGTAGCTGACATGGCTGTTGTTGGGACCACTATGTTCACTTGCATCGTCTGTACTGTCAACTGTCAGATTGCGTTGACAATGAGCCACTTTACATGGATTCAGCACCTGTTTGTATGGGGAAGCATATCCACTTGGTACATCTTTCTCGTATTGTATGGAATGCTTACTCCAGAATATTCCAAGAGTGCCTACCAAATACTGGCTGAAGCTCTTGGTCCTGCGCCTAATTATTGGATAACAACCATTTTAGTTACAGTTACTTGTAATCTTCCTTATTTTGTCCACATTTCCTACCAAAGATGTTTTTATCCCATGGATCATCACATTATCCAAGAAATTAAGTACTACAAAAAGGATATTGAAGACCAACACATGTGGACAAGGGAGCGTTCTAAAGCCAGACAGGAAACCAAGATTGGTTTTACCGCAAGAGTGGAAGCAAAGATCAGGCAACTGAAAGGAAGGCTGCAGAAGAAGCAATCTTCCATGACTATTACTGCCCCATCGTGA | 3696 | 0.4172 | MTRGRIRARLRRSNLYTFGCLKPSTLEDTPHPLQGPGFSRTVYCNQPLLHERKPLYYCRNDISTTKYNVLTFVPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKVNRHKGDGKFGPRSWQNIMVGDVVKVQKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLESTLNLDNDEVFKDFTGTIRCEDPNPNLYTFVGNLEYERQIYPLDPNQILLRDSKLRNTEYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFVIKTKYQTPSWWYLRPDNIEYQYDPKKIGVAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDDTGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGIAYGVRPSDVELAAAKQMASDSEEPDSDLSNFPLPKAKVRVSWDDVKKDEEIGLEAVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLKEPNADDLLMFFRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFVREKFSASRQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGTVFLMCKGADSIIFDRMSKNGKKYLEATTKHLNDYGEAGLRTLALAYRKLEEQEYSAWNNEFQKAKASVGAERDSMLERVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPVTDTVPSDVKQFFCLTPQAIKDNISNQLTNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHQFLALAVDCASVICCRVSPKQKALVTRLVKQGTRKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWYRILGWMGNGLYSSLIIFFLVVTIFYDQAFRGDGQVADMAVVGTTMFTCIVCTVNCQIALTMSHFTWIQHLFVWGSISTWYIFLVLYGMLTPEYSKSAYQILAEALGPAPNYWITTILVTVTCNLPYFVHISYQRCFYPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSSMTITAPS* | 1232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0274 | 1231 | Gene3D | - | 720 | 928 | IPR023214 | - | |
Vra9g0274 | 1231 | SUPERFAMILY | HAD-like | 417 | 943 | IPR036412 | - | |
Vra9g0274 | 1231 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 858 | 969 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vra9g0274 | 1231 | PRINTS | P-type cation-transporting ATPase superfamily signature | 422 | 436 | - | - | |
Vra9g0274 | 1231 | PRINTS | P-type cation-transporting ATPase superfamily signature | 888 | 907 | - | - | |
Vra9g0274 | 1231 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 1229 | - | - | |
Vra9g0274 | 1231 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 916 | 1166 | IPR032630 | - | |
Vra9g0274 | 1231 | Gene3D | - | 113 | 288 | - | - | |
Vra9g0274 | 1231 | Gene3D | - | 589 | 701 | IPR023299 | GO:0000166 | |
Vra9g0274 | 1231 | SFLD | p-type atpase | 405 | 939 | IPR044492 | - | |
Vra9g0274 | 1231 | Pfam | Cation transport ATPase (P-type) | 546 | 651 | - | - | |
Vra9g0274 | 1231 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 424 | 430 | IPR018303 | - | |
Vra9g0274 | 1231 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 57 | 1174 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Vra9g0274 | 1231 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 55 | 1165 | IPR023298 | - | |
Vra9g0274 | 1231 | CDD | P-type_ATPase_APLT_Dnf-like | 59 | 1048 | - | - | |
Vra9g0274 | 1231 | Pfam | Phospholipid-translocating ATPase N-terminal | 42 | 109 | IPR032631 | - | |
Vra9g0274 | 1231 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 519 | 686 | IPR023299 | GO:0000166 | |
Vra9g0274 | 1231 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 1229 | - | - | |
Vra9g0274 | 1231 | SUPERFAMILY | Calcium ATPase, transduction domain A | 146 | 286 | IPR008250 | - | |
Vra9g0274 | 1231 | SFLD | Haloacid Dehalogenase | 405 | 939 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0274 | Vra-Chr9 | 2047991 | 2055532 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0274 | 1 | 1226 | Primary Pumps ATPases | AT1G17500 | 73.839 | 0.0 | 1907 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0274 | K01530 | - | gmx:100784621 | 2295 |