Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0273 ATGAGTTCCTCCACGAAAAAGCACGACGTGTTCGTCAGCTTCAGAGGAGAGGACACACGAACTAACTTCACTAGCCATCTTTGCAAAGCTCTCGAATATAAATCAATCGGAGCTTACATAGATCGCCAGCTAGACAGAGGAGAAACTGTCTGGCCGGCACTTGCCAAAGCAATTCAGGACTCACGTGTCTCAATTGTTGTTTTCTCCGAAAACTATGCTTGTTCCAAATGGTGTCTGGAAGAACTGGTGAAAATTCTTGAATGCAGGAAAAAAATGGGTTTGGCAGTTATACCTATCTTTTACAACATAGATCCATCAGACATAAGGAATCAGAAGGGTACTTACGAGAAGGCATTGACAGAACTGTTGGAATCCAATGAAGAGAAAGGGCCAAAGTGGAAAGCTGCTCTCACTGAAGCAGCCAATATATCTGGATGGGACTCTAGAACACATAGGGACGAAGCTCATGTCATTGAGAACGTTGTCAATGATGTATTGCAAAAGCTTCATCTGCGATGCCCCACTGAATTAAAGGGCCTTGTTGCAAGTGAAGAAAATTGCAGAAATATAGANTTATTACTAAAATCGTGTAGGGTCATTGGAATTTGGGGTATGGGTGGAATTGGTAAATCCACCATTGCTAAAATCTTGTTTGCTAAGCACTTTCCCCAGTATGACCATGTATGCTTTGTGACCAATGCAAAAGAATATTCGCTGGACAAGCTTTTCTCTACCATATTGAAGGAAGAGGTTTCCGAAAAAAATGTCGTAGGGTCATCGTTTCATATGAGGAGACTCAGAAGTAAAAAGGTTTTCATTGTACTTGATGATGTTGACAAGGATAGTTTTGAGCCATTGGAGTATTTATGTNGAGANTATNAAGNCCAGNACAGTGATAGTAAACTNGTTATAACAACAAGAGATAGGCAATTGCTTGTTGNAAGGGTTGATGCGATATACGAGGTTCAGAAATGGAAGAAAACAGAATCTCTGAAGCTTTTTTGCTCAGAAGCCTTTAAGAAAAATTGTCCTGAACGAGGTTATGAGAGTCTCTCAGAAAGTGCAGTTGAATATTCTGGTGGCGTTCCATTAGCCGTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTNNCAGTTTTTGGNAAAGNACTATAAGAAAACTCANCNTNTATCCTAACGAGANAATTCAGNAAGTGTTAGAAATGAGCTACACTGGATTGCATGATCTAGAAAAAAANATNTTTCTAGACATTGTNTTTTTCTTTAGAGAAAAACAGANANATCNANTNACAAGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTCGCAGACAAAGCTTTGTTAACAATTTCATATACAAACATAATACAAATGCATGACTTGCTGCACCAAATGGGTTTGGAGATTGTACGTCTAGAATGTACAACAGATCCTGGCAGACGTAGTCGCTTGAAGGATAGTGATGCTCATGAAGTGATTGAAGAAAACAAGGGAACTGATGCAATTCAAGGAATAGAACTGGATTTGTCTCAAGTTGAAAATTTACGTTTGCGTTCTGACACCTTGACAAAGATGAAAACCTTAAGATTTCTGAGATTCTATAACTCCTCAGGTCAGAGTTCTAGGAATACATACATCGACCTTCCTGCAACTCTTGAGCCATTTTTTGATAAGCTAAGGTACATTGAGTGGATTGGATACCCTTTTGAGTGTCTTCCATCACCTTTTTGTGCAAAGTTTCTTGTTGAGATTCACATGGAACATGGCAAAATTAAACAACTTTGGCAGGGAATCCAGGAACTAGATAATTTAGAGGGAATTAACCTAAGTGGATGCAAACATTTGGAAGAGTTTCCAGATTTGTCTAAGGCGCCGAGACTTAAATGGGTGAATCTCTATTGTTGTGAAAGTTTACGGTATCTTCACCCATCTGTTTTATCCTCGGCCACGCTTGTTACTTTGATACTGCATGGCTGTACAAAACTCGAGAGTGTTAAAGGCGAAAAGCGTTTAAAATCTCTAGGATATATCAATGTCAATGGCTGTTTAAGTCTAGAGGAATTTGCAGTGTCAATAGTTTCAATTGAAATATTTGATTTGAGCAACAAAGAAATCCCAATGTCAGGCACACCAGTAAGGCGAAAGGGAAAACTCAAGACCAACAAAATATTGAAGGAGCTGATGCTATCTAATGGTCGACGACTTGGGAAGGATTTGAATAACTGCAACCTACCTTCCATGCAACATTTGTACATGCTACAGTTAGATCGGTGCAATGTGACAAACTTGCCTGAAATCATTAAGAANTCGGGAAAGTTGACATTTTTGTCCTTGGAGAATTGTGACGGGTTTACGCATCTGCCAAAGCTGTCATCCGGCATCAATTACTTACGTGTCATTAACTGCACTTCACTGGTGTCAGTGTCAGACTTAGACAATTTGGCAAATGTAATGTACGGAAGTAGTAGATTCATTACATTCAAGAACTGCTNGAAATTGGATGAACATTCATGCAAACTTATAATGAAGAGCGTAAAGTTAATAATGGTGTGTGCTGCATTTGACAACCTGGTGAGAAAATCCAGTGACGTCCACGACTACAGTTATAACAGTGTTGAACTTTGTTTGCCAGGAAGCAAGGTCCCACAAGAGATTAAATATCGGAGCACAGAGTCCTCCATTACCATTGACCTTCCCAAACTTTCCAACTTGAGGGGCTTCATTTACTCTGTNGTACTTTCTCCATCTGGTGAAATGAAGAAGCATGACACCAAGATTATATGTAAACGCCACTTGAGAGAAAATACGAGGGAATCATGGGTATATAGTGATATCCAGGGCTTGAACACCGATCATGTTTATATNTGGTATGATCCATTCCACTGTGATGGCATTCTCAAATATAATGAGCCAAGTGTTTGTTTTGAGTTCTGTGTTACAAATGATAAAGGGGAAGTTGATGACTCTAAGTGTATTAAAGAGTGTGGTGTTGGCCTTATAAGTGTTTCAGAACTGCCGAGTGTTTTAGAAGAGTTGGACTGGCACTGGGATAAGAAGAAGGACTTAGTGAATAGAGTGAAATTGGTAACAGGACAAAGGATAACCTTAATAACATCAATTGAACAATCCGATGAGAGGAAGAACCATTTTTCTGCTGTGGAAGAGATTATCAATTCTACCCACAAGGAAGTCAAAACTGATTCTGGCACAGATTGTGGGCAGAATACTACAAAATCTACAAATGCGGTCAAATATAAAGAAAGTGGAGAAACGGCAATCAAACAAGATGCAACATTGCCTGAAACTGTTGAGTCAGAGTTAGACAAAGAAAATGAATCTAAAGAAAAGTCAATGATGGTTGAACTAGAATCAGTTGAAGACAACAGAGGGAGTAAAGAATATTTTTCTGGTGTCAAAGAGAACATTGAATATTGTGCTAGCAGAGCAACCAATGCAACTGCTGAAAGAGGTCCCAAAGAAAAATCTACAAAGTCTACGGAAACTGTAGCTTATGAACATTCACAGAGGTTGGAAGAATCGATTAAGCAAGTTGTAGAAATTCATGATACAGGCAACTCTGTTATTAAATACTCATCCTTGGACCTTGAGAATTGCCTTCAACAGTCGGATAAAAATCCATTTGCAATCCTTGACTTACTTTCTAATGAACTATCCCCTTCACTGAAACAATCAAGTGATGCTACAACCCTCCTCAATGAGTTCCGAACCTTAGTGTTCTCTACTTCGTTGCTGAAGAAAATTCCAGACCAATCCTATCAGCAGCAAGTTACAGAATCACTACAGAAACTTCACACTTATCGTGGAAAAATTACAAAAGAGCAAGAAGCTGGTTTAGACACATTTATAGAGCTCTACAACAAAGCTGTCGACATTTCTCAAGATAAGATGTTAACCGAGGATAACCAAGCAAAACTGGCATCTGAGAAGAGAGACTTGTACAACAAACTTGAACATTCTAAACCGAAAGTTCAGCAGTTTGACACCACCATCTCAACTTATAAATCTCAGAGGGAAATCCTACAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAAAGAACTTGAACAAGAAAATGAAGCCTTGGAAAAGGATAGCTCAACACTAGAGGTTCTATACTCTGAACAACAAACCAAGAAGAAGGAAACACTTGAATCAGTGAAGTGTATTTCGATTTCTGTTGTTCAAACTACCAAACAATTAGAAGAACTTGAAAAGAAAAGATTGAGTTTGGCTTCAGCTTACGAAGGCCTCGAAGAGCCATATCAAAGAATGAAGACAAAACCCCCATTTTAG 4332 0.3864 MSSSTKKHDVFVSFRGEDTRTNFTSHLCKALEYKSIGAYIDRQLDRGETVWPALAKAIQDSRVSIVVFSENYACSKWCLEELVKILECRKKMGLAVIPIFYNIDPSDIRNQKGTYEKALTELLESNEEKGPKWKAALTEAANISGWDSRTHRDEAHVIENVVNDVLQKLHLRCPTELKGLVASEENCRNIXLLLKSCRVIGIWGMGGIGKSTIAKILFAKHFPQYDHVCFVTNAKEYSLDKLFSTILKEEVSEKNVVGSSFHMRRLRSKKVFIVLDDVDKDSFEPLEYLCXXYXXQXSDSKLVITTRDRQLLVXRVDAIYEVQKWKKTESLKLFCSEAFKKNCPERGYESLSESAVEYSGGVPLAVKVLGSYLRSKGXSFWXXTIRKLXXYPNEXIQXVLEMSYTGLHDLEKXXFLDIVFFFREKQXXXXTRILDACGFEATSGIEVLADKALLTISYTNIIQMHDLLHQMGLEIVRLECTTDPGRRSRLKDSDAHEVIEENKGTDAIQGIELDLSQVENLRLRSDTLTKMKTLRFLRFYNSSGQSSRNTYIDLPATLEPFFDKLRYIEWIGYPFECLPSPFCAKFLVEIHMEHGKIKQLWQGIQELDNLEGINLSGCKHLEEFPDLSKAPRLKWVNLYCCESLRYLHPSVLSSATLVTLILHGCTKLESVKGEKRLKSLGYINVNGCLSLEEFAVSIVSIEIFDLSNKEIPMSGTPVRRKGKLKTNKILKELMLSNGRRLGKDLNNCNLPSMQHLYMLQLDRCNVTNLPEIIKXSGKLTFLSLENCDGFTHLPKLSSGINYLRVINCTSLVSVSDLDNLANVMYGSSRFITFKNCXKLDEHSCKLIMKSVKLIMVCAAFDNLVRKSSDVHDYSYNSVELCLPGSKVPQEIKYRSTESSITIDLPKLSNLRGFIYSVVLSPSGEMKKHDTKIICKRHLRENTRESWVYSDIQGLNTDHVYXWYDPFHCDGILKYNEPSVCFEFCVTNDKGEVDDSKCIKECGVGLISVSELPSVLEELDWHWDKKKDLVNRVKLVTGQRITLITSIEQSDERKNHFSAVEEIINSTHKEVKTDSGTDCGQNTTKSTNAVKYKESGETAIKQDATLPETVESELDKENESKEKSMMVELESVEDNRGSKEYFSGVKENIEYCASRATNATAERGPKEKSTKSTETVAYEHSQRLEESIKQVVEIHDTGNSVIKYSSLDLENCLQQSDKNPFAILDLLSNELSPSLKQSSDATTLLNEFRTLVFSTSLLKKIPDQSYQQQVTESLQKLHTYRGKITKEQEAGLDTFIELYNKAVDISQDKMLTEDNQAKLASEKRDLYNKLEHSKPKVQQFDTTISTYKSQREILQKRQREIQEAIKELEQENEALEKDSSTLEVLYSEQQTKKKETLESVKCISISVVQTTKQLEELEKKRLSLASAYEGLEEPYQRMKTKPPF* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0273 1443 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 146 IPR035897 -
Vra9g0273 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 418 IPR027417 -
Vra9g0273 1443 Coils Coil 1346 1384 - -
Vra9g0273 1443 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 1051 IPR044974 GO:0006952
Vra9g0273 1443 SMART till_3 7 143 IPR000157 GO:0007165
Vra9g0273 1443 Gene3D Ribonuclease Inhibitor 510 673 IPR032675 -
Vra9g0273 1443 Gene3D Ribonuclease Inhibitor 674 857 IPR032675 -
Vra9g0273 1443 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 1051 - -
Vra9g0273 1443 SUPERFAMILY L domain-like 463 849 - -
Vra9g0273 1443 PRINTS Disease resistance protein signature 199 214 - -
Vra9g0273 1443 PRINTS Disease resistance protein signature 265 279 - -
Vra9g0273 1443 PRINTS Disease resistance protein signature 359 373 - -
Vra9g0273 1443 PRINTS Disease resistance protein signature 605 621 - -
Vra9g0273 1443 ProSiteProfiles TIR domain profile. 6 169 IPR000157 GO:0007165
Vra9g0273 1443 Pfam TIR domain 7 174 IPR000157 GO:0007165
Vra9g0273 1443 Gene3D - 4 165 IPR035897 -
Vra9g0273 1443 Gene3D - 325 408 IPR042197 -
Vra9g0273 1443 Coils Coil 1406 1426 - -
Vra9g0273 1443 Pfam NB-ARC domain 199 390 IPR002182 GO:0043531
Vra9g0273 1443 Gene3D - 166 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0273 Vra-Chr9 2039035 2045708 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0273 3 807 WRKY Transcription Factor Family AT4G12020 30.368 7.63e-77 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0273 - - vun:114166184 2320.04