Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0271 ATGGAAAGTTTGGAGATGTCTTCCACCTTTGGAGAAAAGCACGATGTTTTTCTGAGCTTCAGAGGAGCGGACACACGAACAAACTTCACAAGCCATCTTCTGAATGCTCTGACTCAGAAATCAATCAGCGCATTCATAGATTACGAACTCATCAGAGGAGACTACACTTGGCCAGCCCTTGAAACAGCAATCGAGAAGTCCCTTCTGTCAATTGTTGTTTTATCCGAAAACTATGCTTCCTCCACCTGGTGCTTGAAAGAGCTGGCGCATATACTCGAATGCAGAAGAAAGCGAGGTATGGTTGTTATACCCGTCTTCTATGAAGTAGATCCCTCACACGTGAGGAAGCTGAGTGGGAGTTTCGAGAAGTCATTCGCAAAGCATGAGCGAGACAGCACATCATTTGACCGAATATCCCAGAGGAAGGATGTTTCTATGTGGAAAGCTGCTCTCAAAGAAGTAGCCAATATTTCTGGATGGGACTCCAGATCATACAGAGATGAAGCTCAGGTCATCCAGAATCTTGTCAATGATGTATTGCAAAAGCTACACCTAAGATATCCTACGGAACTAAATGGCTTAGTCAGAATTAAAAATACTTGTGCAAAGGTGGATTTGTTACTGCGAAAATCTCGAGTCATTGGAATTTGGGGTATGGGGGGAATTGGCAAGTCAACCATTGCTAAAGCCTTGTTTGCCAAATACTTTCCCTATTTTGATCATGTCTGCTTCATGGCCAATGCAAATGAATTTTCGCTTGATAAGCTTTTCTCTGAGCTATTCAGAGAGGAAGTTTCCGCATCAAATGTGGTAGGATCATCATTTGATATGAGGAGACTCAAAAGGAAAAGGATTTTCATTGTACTTGATGATATGGATTGTTTAGACCTATTGGAATATTTATGTAGAGAGTATCAGAGCCTAGATCCCAATAGTAAACTCATCATAACAACACGTGATAAGCAATTGCTTGAGGGAAGAGTTGATCAGATCTATGAGGTCAAGAAATGGGAAACCAGAGCATCTTTAAAGCTTTTTTGCTTAGAAGCATTCAAGAAAAGACATCCCAAAAGGGGTTATGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCTGGTGGTGTTCCATTAGCTCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCAATTTTTGGGAAAGTACTATAAGAAAACTCAGCATGTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGACCTACACTGGATTACATGATCTTGAAAAGAATATATTCCTAGACATTGTATTTTTTTTCAAAGAGAAACAGAAAGATCATGTCATAACAATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAATTCTCGCAGACAAAGCTTTGTTAACAATTTCATATAGAAAGATAATACACATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTTCGTCAAGAGAGTAGTGGGGATCCTGGTAGACGTAGTCGATTGAAGGATAAAGAAGCTCGGGAAGTGATTGAAGAAAACAAGGGAACTAGTGCTATTCAAGGCATAGCATTAGATCTGTCTCAAATTAAAGGTTTAATTTTGCATGCTGATACATTCACAAAAATGAAAACCTTGAGATTTCTAAAATTCTACAACAAATTGGGTCAGAGTGCCAGAGATACATACCTTGACCTTCCTGCAACTCTCGAGCCATTTTCTGATAAACTGAGGTACATTGAGTGGATTGGATACCCGTTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGGTTCTTGTTGAGATTCACATGCCACACAGCAAAGTAAAACAACTTTGGCAGGGGATCCAGGAGCTTAATTATTTAGAAGGAATTAACCTAAGACAATGCAAGCAGTTTGAGGAGCTTCCGGATTTGTCTAAGGCACCGAGACTTAAATGGGTGAATCTCTCCTGCTGTGAAAGTTTGTGCTATCTTCATCCATCTGTTTTATCCTCAGGCACCCTTGTTACTTTGATACTGGATAAGTGTACAAACCTCAAGAGTGTTAAAAGTGAGAAAGATTTAAAATCTCTTGAAAAGATCAGTGTCAATGGCTGCTTAAATCTGGTGGAATTTGCAGTTTCGTCCGATTTAATTGAAAATTTGGATTTAAGCAATACAGGAATCCAAATGTTGGGCACATCAATAGGGAGTATGCATAAACTTAAGTCGCTCAATCTGGAGGGCTTAAAACTCAAGCCTGTTTTAAAAGAGCTATCTTGCTTGACATCGCTGAAGGTGCTGAAGATTTCTGATAATGGACTAGTTATTGACAAACAGCAAATACATGTCCTGTTTAGTGGATTAAGGTACTTACAAATACTATATTTGAAAGATTGTAGTAAGTTGTTTGAACTCCCCGACAATATCAATCTCTTAACACAATTACAAGAACTAAGGTTAGACAGAAGCGATTTGAAAAGGTTGCCCGAAAACATTAAGAATCTTCAAATGTTGGAAATTCTGTCCCTGGAGGATTGCAAGGAGCTTCTTTGCCTGCCAACGTTTCCATCCCTCATCAAGTACTTACGTGTCATTAACTGCACATCATTGGTGTCAGTGTCAAACTTAAAGACTTTGGCAATAGAGATGTTGGGAATGACCAAACGCATTACATTCAAGAATAGCGGGAAATTGGATGAAGATTCACTCAGAATTATTATGGAAAGCCTCCATTTAACAATGATGAGTGCTGCATATCACAATGTGTTAGTAAGAAAAACATATGGGACGTACAACAGCTGCAACTATACGAGTGTTGAGCTTTGTTTACCCGGAGGGAGTGTCCCTGAGCAGATTCATTATCGATCCACTCAGTCCTCCATTACCATTGTACTTCCTCCACATTCTGAATTACTGGGCTTCATTTACTCAGTGGTTCTTTCTCCAGCTGGTGGAAAGAAGACTTTTGGCACTAAGATATTTTGTAAATGCCACTTGCCAGAAGAAGGTATAAAAGCAACATGGCTATATGGTGATATCAGGGGATTGAAGTCGGATCATGTTTATGTATGGTATGATCCATTACACTGTGACAGCATTCTCAAATATTATAAACAGTCAAAAGTTTGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATCTGTATTAAAGAGTGTGGAGTAGGGCTTGTAAATGTTTTAGAAATGCATAGTGTTTTACAAGAGTTGGACTTTGATTCGGATAAGAAAAAGGAGTTGGTGGAGGGAGTGGAGTCTGAATCAAAGCATAGAAAGCTAGATTGGAGTGAATCAAGCTCTTCAGATAGTCTAACAACTCCAAGGAGCTCCTCTGTCACACAATCAGAGATAGTAGAGATGATTGAGCTAGAGAACACTGAATCTACTTGCAAGGAAACCCTGAGCACTGCTGAAAGAGGTCCCAAAGAAAAACTTAGAGAGTCTACAAAAATTGTGGCCGATGAACATTTACAGAGCACATCTCTTCAAGCCTCTTCCCAAGGGGGTTCTGAGCACTTGCATGATAGGTTAGAAGAATCAAAGAAGCAAGTTGTAGAAACTTATGATACAGAGAAATTTGTTACTAAATACTCGTACTTTGACCTTGAGAGTTGCCTCCAACAGTTGGATGAAAATCCATTTGCAATCCTTGACTTACTCTCTAATGAGCTATCCCCTCTGAAACAATCAGAAACTTGTGTTCAAAGGGTAGCTCAAGCAAATGATGCTACAACCGTCCTCAATGAATTCCGAACCTTAGTGTTCTCAACTTCATTGCTAGAGAAACTTCCAGACCAATCCTATCGGCAACAAATTGAAGAGTCACTACGAAAACTTCACACTTATCGTAGAGAAATTACGGAGGAGCAAGAAGGTGTAGACAAATTTATCGAGCTATACGAAAAAGCTGCCAACATTTCTCAAGAAAAGATGCTAACCGAGGATAAACAAACAAAACTGGCATCTAAGAAGAGAGACTTGTATAACAAACTTCAAGATTCTAAACTGAAAGTTCAACAGTTTGACACTGCCATCTCAACTGATAAGTCAGAGATTGAAAACCTCCAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAATAAGCTTCAACAAGAAAATGAAGCCTTGGAAAAGGAGAGGTCAGCACTAGAGGTTTTATACTCAGGAAAACAAACCAAGAAGAACGAAACACTTGAACTAGTGAAGCATATATCGACTTCTGTTGTTTACACAACCAAACAATTAGAAGAACTTGAAGAGAAAAGATTGAGTTTGGCTTCAGCTTACGAAGACCTCAAAGAGCCATATGGAACAATGAAGACAAAGCCCCCATTTTAG 4356 0.393 MESLEMSSTFGEKHDVFLSFRGADTRTNFTSHLLNALTQKSISAFIDYELIRGDYTWPALETAIEKSLLSIVVLSENYASSTWCLKELAHILECRRKRGMVVIPVFYEVDPSHVRKLSGSFEKSFAKHERDSTSFDRISQRKDVSMWKAALKEVANISGWDSRSYRDEAQVIQNLVNDVLQKLHLRYPTELNGLVRIKNTCAKVDLLLRKSRVIGIWGMGGIGKSTIAKALFAKYFPYFDHVCFMANANEFSLDKLFSELFREEVSASNVVGSSFDMRRLKRKRIFIVLDDMDCLDLLEYLCREYQSLDPNSKLIITTRDKQLLEGRVDQIYEVKKWETRASLKLFCLEAFKKRHPKRGYESLSESAVEYAGGVPLALKVLGSYLRSKGINFWESTIRKLSMYPNERIQKVLEVTYTGLHDLEKNIFLDIVFFFKEKQKDHVITILDACGFEATSGIEILADKALLTISYRKIIHMHDLLQQMGLEIVRQESSGDPGRRSRLKDKEAREVIEENKGTSAIQGIALDLSQIKGLILHADTFTKMKTLRFLKFYNKLGQSARDTYLDLPATLEPFSDKLRYIEWIGYPFESLPSPFCAKVLVEIHMPHSKVKQLWQGIQELNYLEGINLRQCKQFEELPDLSKAPRLKWVNLSCCESLCYLHPSVLSSGTLVTLILDKCTNLKSVKSEKDLKSLEKISVNGCLNLVEFAVSSDLIENLDLSNTGIQMLGTSIGSMHKLKSLNLEGLKLKPVLKELSCLTSLKVLKISDNGLVIDKQQIHVLFSGLRYLQILYLKDCSKLFELPDNINLLTQLQELRLDRSDLKRLPENIKNLQMLEILSLEDCKELLCLPTFPSLIKYLRVINCTSLVSVSNLKTLAIEMLGMTKRITFKNSGKLDEDSLRIIMESLHLTMMSAAYHNVLVRKTYGTYNSCNYTSVELCLPGGSVPEQIHYRSTQSSITIVLPPHSELLGFIYSVVLSPAGGKKTFGTKIFCKCHLPEEGIKATWLYGDIRGLKSDHVYVWYDPLHCDSILKYYKQSKVCFEFCVANDKGEVDGSICIKECGVGLVNVLEMHSVLQELDFDSDKKKELVEGVESESKHRKLDWSESSSSDSLTTPRSSSVTQSEIVEMIELENTESTCKETLSTAERGPKEKLRESTKIVADEHLQSTSLQASSQGGSEHLHDRLEESKKQVVETYDTEKFVTKYSYFDLESCLQQLDENPFAILDLLSNELSPLKQSETCVQRVAQANDATTVLNEFRTLVFSTSLLEKLPDQSYRQQIEESLRKLHTYRREITEEQEGVDKFIELYEKAANISQEKMLTEDKQTKLASKKRDLYNKLQDSKLKVQQFDTAISTDKSEIENLQKRQREIQEAINKLQQENEALEKERSALEVLYSGKQTKKNETLELVKHISTSVVYTTKQLEELEEKRLSLASAYEDLKEPYGTMKTKPPF* 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0271 1451 MobiDBLite consensus disorder prediction 1104 1119 - -
Vra9g0271 1451 PRINTS Disease resistance protein signature 213 228 - -
Vra9g0271 1451 PRINTS Disease resistance protein signature 279 293 - -
Vra9g0271 1451 PRINTS Disease resistance protein signature 371 385 - -
Vra9g0271 1451 PRINTS Disease resistance protein signature 828 844 - -
Vra9g0271 1451 MobiDBLite consensus disorder prediction 1135 1154 - -
Vra9g0271 1451 Gene3D - 11 183 IPR035897 -
Vra9g0271 1451 SUPERFAMILY L domain-like 476 876 - -
Vra9g0271 1451 Pfam NB-ARC domain 210 408 IPR002182 GO:0043531
Vra9g0271 1451 Coils Coil 1351 1392 - -
Vra9g0271 1451 PANTHER NB-ARC DOMAIN PROTEIN 12 951 - -
Vra9g0271 1451 Gene3D - 184 333 IPR027417 -
Vra9g0271 1451 Pfam TIR domain 13 189 IPR000157 GO:0007165
Vra9g0271 1451 SMART till_3 13 157 IPR000157 GO:0007165
Vra9g0271 1451 MobiDBLite consensus disorder prediction 1162 1176 - -
Vra9g0271 1451 Pfam Leucine Rich Repeat 599 617 IPR011713 -
Vra9g0271 1451 Gene3D - 338 420 IPR042197 -
Vra9g0271 1451 MobiDBLite consensus disorder prediction 1097 1119 - -
Vra9g0271 1451 MobiDBLite consensus disorder prediction 1162 1184 - -
Vra9g0271 1451 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Vra9g0271 1451 Gene3D Ribonuclease Inhibitor 711 893 IPR032675 -
Vra9g0271 1451 Gene3D Ribonuclease Inhibitor 498 710 IPR032675 -
Vra9g0271 1451 ProSiteProfiles TIR domain profile. 12 183 IPR000157 GO:0007165
Vra9g0271 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 430 IPR027417 -
Vra9g0271 1451 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 951 IPR044974 GO:0006952
Vra9g0271 1451 Pfam C-JID domain 938 1064 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0271 Vra-Chr9 2018093 2030199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0271 783 868 WRKY Transcription Factor Family AT4G12020 33.721 5.87e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0271 - - vun:114165831 2480.29