Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0251 ATGGGACTGCCGCTGATTTTCCTGCTAATTCAGCTGCATTTAGTTGTCTGCACTCAGCAGATTCATGAATATGCAGCCACCAAACTGCAACATTCCAGTGACAGAAGCCATTTTAGTATTGCAATCCCACCAAAGTCATCTTCTGAAGGTCATTCAAGTATTGCACATTCACCTTCCAAGTCATCTTCTGGGGTACCTACAAGCATTGCACTTTCACCTTCCAAGTCAATTCACAAAGCTCCTACAATCATATGGACACATGGTTCTGTGGATTCCCCAATCTCACATCATAAGCATCAGTATTCTAAAAGAAAGTCCCACAATCCAACTCTAGCACCAATCTATGCAGTCCAGCCTCCAACATACAGCCATCAAGGCCCTTCGGTTTTCAAATCACGACCCCCTTTCTCTTCACCAAATGTTAAGGATATTCATGCCCCAGCCCCTGCACCATCACCAGCTATTGTACCAAGTCACTTCAATGTACCCTCTACTTCACCAACAATTTCTCCTCTAGGTTCATCATTGCACAAGAAAAAGACTCCACCACCAGCATATGAATTTGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGTCGATGACTTGCTCAGACCCCTTGACGTATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAAATCCATATCAACATTGCAATATACAAGTTTTTTCCATTGGTTGCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTGCTGAACCATACCCAGGTTCGCATTGTGGAAGCTGATGCAGCTAGTCAGCAACTGGAGAAAACCACTGTTCTCATAGATTTAGTACCCAAAGGAGTAAAATTTGATGATACCACTGCATTTTTAATATATAAGAAATTCTGGCGCAGAGAGATTCTCATAGATGCTTCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCGTCAACTCCCTCGGATGCTTCTGTTATAGATGATGAGCCAAATCCAGGACATGACCACAATGGAATGATGATGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAACAAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGATCTGTGCGCTGAAATGCTGTGCCTATGTTCATGAACACAAACCAGTTCCAGATGGTTTAATTTCATCCTCTTCAAAACAATCAAGGGCTGCTAGGTCATTGCCTCACGGGATCAGGTCAGGTTCTGGATCACAGTCTTTCAATTCTGGAACAATAACATACACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTAGAGAAAGCAACAAATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGGGATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGTCGGGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTACACCATCGAAATTTAGTTACATTGTTTGGTATATGCATAGAGAAACAGACTCGTTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTTTGGAATCTCACTTACATGGAGCTGACAAGGAAACTGGTCCACTGGATTGGAATGCACGGATGAAGATTGCTCTCGGTGCAGCTCGGGGTCTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGGGATTTCAAGGCCAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGACTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATTTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTTCTAACTGGAAGAAAGCCCGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACATGGGTTCGTCCACTTCTCACCAGTAAGGAGGGTCTGCAGATGATCATAGACCCAGTTGTAAAGCCTAACATTTCCGTTGATATTGTAGTTAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCACAACGTCCATTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTGGTGTGTAGTGAGGTTGAGGAAACAGACTATTTAAGATCAATGAGTTATCAAGAGGATTTTCTAACTGATGTGGAAGGAAAGTTTTCTGAAGCTTCAGGTGAAAGAGTGGAATTTTCAGAGTATCAAAAAACTCTATCTGGCTATCAATCAGGTGAAGAAAAGGTAGAATTATCAGCATCAGAGTTTCTCGGTGCTTCAGGTCAGGAATTTCAATCATTCAGGAGGTATTCTCGATCAGGGCCTCTAACCATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGAGAAGTTTGTCTGGTGGTAGTACCAGTGAACATGGATTTTCAACGAAACTATGGCCGGGATCTCATTAA 2568 0.4272 MGLPLIFLLIQLHLVVCTQQIHEYAATKLQHSSDRSHFSIAIPPKSSSEGHSSIAHSPSKSSSGVPTSIALSPSKSIHKAPTIIWTHGSVDSPISHHKHQYSKRKSHNPTLAPIYAVQPPTYSHQGPSVFKSRPPFSSPNVKDIHAPAPAPSPAIVPSHFNVPSTSPTISPLGSSLHKKKTPPPAYEFVLPPPPPNKDCLSMTCSDPLTYTPPGSPCGCVWPLQVKIHINIAIYKFFPLVAELAKEIAASVLLNHTQVRIVEADAASQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWRREILIDASVFGAYEVLYVHYPGLPPSPPSTPSDASVIDDEPNPGHDHNGMMMKPLGVDVPKKNKEGSNGRMIVIIVLSSVTAFVVFIGLAWICALKCCAYVHEHKPVPDGLISSSSKQSRAARSLPHGIRSGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKQTRCLVYELVPNGSLESHLHGADKETGPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPNISVDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEVEETDYLRSMSYQEDFLTDVEGKFSEASGERVEFSEYQKTLSGYQSGEEKVELSASEFLGASGQEFQSFRRYSRSGPLTIGKKRQFWQKLRSLSGGSTSEHGFSTKLWPGSH* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0251 855 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Vra9g0251 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Vra9g0251 855 Pfam Protein tyrosine and serine/threonine kinase 467 737 IPR001245 GO:0004672|GO:0006468
Vra9g0251 855 SUPERFAMILY Protein kinase-like (PK-like) 443 737 IPR011009 -
Vra9g0251 855 PANTHER OS01G0750732 PROTEIN 6 854 - -
Vra9g0251 855 CDD STKc_IRAK 470 738 - -
Vra9g0251 855 Gene3D Phosphorylase Kinase; domain 1 436 539 - -
Vra9g0251 855 MobiDBLite consensus disorder prediction 35 71 - -
Vra9g0251 855 ProSiteProfiles Protein kinase domain profile. 464 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0251 855 Gene3D Transferase(Phosphotransferase) domain 1 540 759 - -
Vra9g0251 855 PANTHER OS01G0750732 PROTEIN 6 854 - -
Vra9g0251 855 MobiDBLite consensus disorder prediction 327 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0251 Vra-Chr9 1851093 1856958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0251 196 850 Receptor kinase-like Gene Family AT5G56890 60.030 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vra9g0251 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0251 - - gmx:100814040 1485.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2532 5 32173195 32177222 Vra9g0251 9 1851093 1856958 PCT