Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0244 ATGGACAATATTTTGATCGTGTCTGTGACAGTGTTTCTCTTATGCACTGTGATCCTCCTCTACAGGAACAGGCTCAGCCTCATGCTCAAATCAAAATATAGAAATAAACTTCCATCAGGCACTCTTGGATGGCCTTTTATCGGTGAAACTCTTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGAAGCCGCGTGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACAATTGTTTCCACGGATGCTGATGTGAACAAGTTCATACTGCAAAGTGATGCAAAAGTTTTTGTTCCTTCTTATCCCAAGTCTCTTACTCAGTTGATGGGAGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAAAGGAGAATACATGGACTTATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCAAAGAATCAATGTCTAGTTGGAAAGAGGACTGCCCCGTATACATACAAGACGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCACTGATTAGTTTGGATCCAGGACAAGAAATGGAACTTCTGAAGAAACATTTTCAGGAATTTATCTCTGGCCTCATGTCTCTACCAATAAATCTACCAGGAACTAAACTTTATCAATCTTTGCAGGCAAAGAAGAAAATGGTGAAATTAGTGCGGAGAATTATCCTAGCTAAAAGAAATAGTGGCATTTGCAGAGTTCCAAAAGATGTGGTGGATGTGCTTCTCAATGATGCAAGTGAAAAATTGACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGGGAAGACTCAGTTCCAGTTCTTATGACTCTAGCTACAAAATATCTATCAGAATGTCCAGCTGCTTTGCAGCAATTGACGGAGGAAAATATGAAGCTTAAGAAAATTCAAGATCAGGTTGGTGAGTCCTTGTGTTGGAGTGATTACCTATCATTGCCATTTACTCAAACAGTCATCACTGAAACTCTCAGAATGGGAAATATCATAATTGGAGTAATGAGAAAGGCCTTAAGAGATGTTGAAATAAAAGGGAACTTAATACCAAAAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGACAGAAACTATGACTGTCCATATCAGTTCAATCCATGGAGGTGGCAAGACAAAGATATGAGCAGTTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGCTTTGCCCAGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTACACCACTTTGTCACTCAATTCAGATGGCATGCTGAAGCAGATGCAATAGTGAACTTTCCCACAGTAAGAATGAAAAGGAGGATGCCTGTGATGGTAAGGAGAGTGGAATCTTAA 1425 0.4014 MDNILIVSVTVFLLCTVILLYRNRLSLMLKSKYRNKLPSGTLGWPFIGETLEFVSCAYSDRPESFMDKRSRVYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTQLMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVKESMSSWKEDCPVYIQDETKKIAFHVLVKALISLDPGQEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRRIILAKRNSGICRVPKDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMKLKKIQDQVGESLCWSDYLSLPFTQTVITETLRMGNIIIGVMRKALRDVEIKGNLIPKGWCVFANFRSVHLDDRNYDCPYQFNPWRWQDKDMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWHAEADAIVNFPTVRMKRRMPVMVRRVES* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0244 474 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 SUPERFAMILY Cytochrome P450 32 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 20 467 - -
Vra9g0244 474 Pfam Cytochrome P450 38 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Vra9g0244 474 Gene3D Cytochrome P450 28 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0244 474 PANTHER CYTOCHROME P450 26 20 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0244 Vra-Chr9 1781155 1785884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0244 36 445 Cytochrome P450 AT3G13730 67.711 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0244 K12638 - gmx:100782687 859.751