Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0239 ATGGCTTCAAGCTCTGGTGCAGAAGAAGCGTCACTGGACGATTACGCTTCCTTGATTGCAACCACCGATGTGGAGCTTCTGAAGCGAGCATGGCGCAACGAGAAGGCGGCGCCGGAGATTCTCCGCTACGAATATCGTTTGATTTCCCGCGTCAAGGAACAGATTCAACTCATGGAGGAAACCGTGGAGGAGAAATCCAGTGTCGGTAATGATCCTCTCTCAGTGTCTCTGTATCAGATGGACTTGGACAGAACGCAATTTCTGTTGAGATCCTATCTCCGCATCCGCATACAGAAGATTGAGAAGTACATGTTCCACATCCTAAAAACCGAAGAACTTTGGTCCAGGCTATCCAAAGACGAGAAAGATTTCGCCAGAACGTGTACAAGTGACCTAAACCAACATCTGGAGTTGACTGTTCTGTCAAAGCTGCCAGAAAATTATCAGTCTGTTCTAAAGCAATCTATAACAAGTGAAGAAGACGACATGGTCCCAGAACCACAACTGGACACATTTGTTTTATGTAGAAGTAAAGAGTATCTAACGGGCATTCAACTCGAAGATGGACCTGCTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTCCATTTCATATGTTACAGATCAATAAAACCACTTGTGGAGAGCGGCAAAATTGATCTACTCTGA 678 0.4587 MASSSGAEEASLDDYASLIATTDVELLKRAWRNEKAAPEILRYEYRLISRVKEQIQLMEETVEEKSSVGNDPLSVSLYQMDLDRTQFLLRSYLRIRIQKIEKYMFHILKTEELWSRLSKDEKDFARTCTSDLNQHLELTVLSKLPENYQSVLKQSITSEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPADDRSKLFEMEPGVLHFICYRSIKPLVESGKIDLL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0239 225 PIRSF GINS_Sld5 1 225 IPR008591 GO:0006261
Vra9g0239 225 SUPERFAMILY GINS helical bundle-like 20 152 IPR036224 -
Vra9g0239 225 PANTHER SLD5 PROTEIN 11 225 IPR008591 GO:0006261
Vra9g0239 225 Pfam DNA replication complex GINS protein SLD5 C-terminus 167 225 IPR031633 -
Vra9g0239 225 CDD GINS_A_Sld5 23 141 IPR038749 -
Vra9g0239 225 Pfam GINS complex protein 50 122 IPR021151 -
Vra9g0239 225 Gene3D - 9 215 - -
Vra9g0239 225 SUPERFAMILY PriA/YqbF domain 169 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0239 1 172 Core DNA Replication Machinery Family AT5G49010 63.953 8.83e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0239 K10735 - gmx:100784291 361.303