Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0217 ATGGCGACTGTTCCAGGGCAACTCGTGTGGGAGATCGTGAAGAAGAACAACTCCTTCTTAGTGAAACAGTTCGGAAGAGGGACTCAGAGCGTCGAATTCAGCAGAGAGTCCAACAATCTCTACAACCTCAATTCGTACAAATTCTCTGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGTTGGTAAGGATCTATCTGTTTTGTTGGCTACAACTAAGACAAAGAAGCAGAACAAGCCTGCTTCATTGCTCCACAAATCTGTGATGAAGAAGGAGTTCCGTAGGATGGCAAAAGCCGTTGAAAATCAGGTTGCGGATAATTACTACAGGCCTGATCTTAAGAAGGCCGCCCTTGCAAGGTTGAGTGCTGTTAACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTGAAGAAGAGGAACAGACAGGCCGTGAAGGTCTCTGGTAGGAAGTGA 453 0.4614 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSYKFSGLANKKTVTIQPVGKDLSVLLATTKTKKQNKPASLLHKSVMKKEFRRMAKAVENQVADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKVSGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0217 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Vra9g0217 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Vra9g0217 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Vra9g0217 150 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0217 Vra-Chr9 1542554 1544687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0217 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.126 5.64e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0217 K02903 - gmx:100499921 274.248