Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0210 ATGGAAAGCAATGGTGAAGCAGAAAACAGTTGTGAGAAAGTTTGTTCTCCATCATCAGAAAAGCCATCACCAATGAAGAAGAACAACAAGAAGAACAAGAAGAAGAAGCTTTGTTGCAGATATTGTAACAAGAAGTTCTGCAGTTACCAAGCCTTGGGTGGACATCAGAATGCACACAAGGCAGAAAGAGCAGTAGCACAGAGAGAGAAGATTCTGAACATGGCTTCTGCATCTGACAGAAGTTCATATGTTGCTGGCTTTGTTGATTCAAACAACTGTTATGGATTGAGAGAAAAATCATGTGGGGTGTCAGCAATTTCCATGACTCATTTCAAGCCATATTTTGGACTCAAACATGATTATCAATGGTTAGGGCAGTATACTTCGGATTATGTTCAAGACACCATTCTAAAGTTGCAGACTTTGAATGCTGAAGGAAGTGGATTTCATCAACATCACACATCATATCAACCTTTAAATTTTTCTATACTTGGAGGTGAAAAACCAAATTCAGGGTCATTGTTTAATACTGATAAGGAAAAAGATTCTGCAGTGATATCTCATAATGAAATCACAATGATGCATGATTTGAATGTCAAGAATTCAAATTCTGATGAAGAAAATGGTTTTTCTGCAATGGCTACTGATAATGGAGTGGTGGAGGAACTTGATTTGACTCTCAAGATTGCCAATGGAGTGATGGAGGAGCTTGATTTGACTCTCAAGATTTGA 732 0.377 MESNGEAENSCEKVCSPSSEKPSPMKKNNKKNKKKKLCCRYCNKKFCSYQALGGHQNAHKAERAVAQREKILNMASASDRSSYVAGFVDSNNCYGLREKSCGVSAISMTHFKPYFGLKHDYQWLGQYTSDYVQDTILKLQTLNAEGSGFHQHHTSYQPLNFSILGGEKPNSGSLFNTDKEKDSAVISHNEITMMHDLNVKNSNSDEENGFSAMATDNGVVEELDLTLKIANGVMEELDLTLKI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0210 243 MobiDBLite consensus disorder prediction 1 30 - -
Vra9g0210 243 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Vra9g0210 243 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 228 IPR044246 GO:0009788
Vra9g0210 243 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Vra9g0210 243 MobiDBLite consensus disorder prediction 1 23 - -
Vra9g0210 243 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
Vra9g0210 243 Gene3D Classic Zinc Finger 15 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0210 Vra-Chr9 1474960 1475691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0210 23 113 C2H2 Transcription Factor Family AT5G10970 38.462 5.19e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0210 - - vra:106773069 455.292