Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0207 ATGGCGACGGCGCCGGGAAACCAAATGCTGGAGGGAGGAGGAGCGCCGCCGCCTCCTGGGACTGATATGACCGGAATATGCTTCCGAGACCAGCTCTGGCTCAACAGCTTCCCTCTTGATCGCAACCTTGTCTTCGATTACTTCGCCCTTTCCCCTTTCTATGATTGGACTTGCAACAACGAGCAACTCCGTATGCGATCCGTTCACCCCCTCGACCTCTCTCAACTTTCGAAAATGACGGGGACGGAGTATATGCTCAGCGAAGTTATGGAGCCGCACCTGTTTGTTATTCGCAAGCAGAAGAGAGATAGCCCCGACAAAGTTACGCCTATGCTCGCCTACTACGTCCTCGATGGTTCCATATACCAGGCTCCGCAACTCTGCAATGTTTTTGCTGCCAGAATTGGAAGGGCCCTTTATTACATACAAAAGGCATTTACTACAGCTGCCTCCAAGTTGGAGAAGATTGGATATGTGGATTCTGAAAATGAGACTGCATTGGTGGAGTCAAAGACTGCTAAGGAGACGATTGACATAAAGGAAGTTAAGCGTGTAGATCATATTCTTGCATCCTTGCAACGCAAGTTACCACCAGCTCCGCCTCCACCACCCTTTCCAGAAGGGTATGTACCACCTCCTACAGCTGAAGCTGAGAAAGGCACCGAAACTCAGGAAGCAGCAGAAACACAAGCTGCTACTGCTGATCCCATAATTGATCAAGGACCAGCAAAAAGAATGAAATTTTAA 747 0.494 MATAPGNQMLEGGGAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAATADPIIDQGPAKRMKF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0207 248 PANTHER MED-6-RELATED 14 248 IPR007018 GO:0003712|GO:0006357|GO:0016592
Vra9g0207 248 MobiDBLite consensus disorder prediction 195 211 - -
Vra9g0207 248 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 14 248 - -
Vra9g0207 248 Pfam MED6 mediator sub complex component 26 151 IPR007018 GO:0003712|GO:0006357|GO:0016592
Vra9g0207 248 MobiDBLite consensus disorder prediction 1 21 - -
Vra9g0207 248 Gene3D Mediator complex, subunit Med6 20 149 IPR038566 -
Vra9g0207 248 MobiDBLite consensus disorder prediction 194 248 - -
Vra9g0207 248 PIRSF MED6_meta/plant 13 248 IPR016820 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Vra9g0207 Med6 9.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0207 K15128 - gmx:100792248 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0207 9 1455036 1459171 Vra9g0207 9 1455036 1459171 ECH