Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0206 ATGGAGGAGGTTGTGGAGGATAAGGAGGTGAAGGTGAGGAGGATGAAGGAGGCGCACAGGAGTGGGAAACTGGTGTTCTGTTGCGGGGAGGTGCAGCAATATACGCTGGAGATGTTGATGCGGGCTTCGGCAGAGTTGCTGGGGAGGGGGAGTGTGGGGACGGCGTACAAAAGGGTGCTGGATTCGCGGTTGATTCTGACGGTGAAGAGGTTGGATGGGGGGAAGAGTGGGGAGAGTGATGGAGTAGTGTTTCAGCGCCACATGGAGGCTGTAGGGAGGCTTCGCCATCCCAATTTGGTTCCTTTGAGGGCTTATTTTCAGGCCAAGGTAGAGAGGCTTGTCATATATGATTATCAGCCCAATGATAGCATCTTCAACCTCGTTGACGGTAGCCACTATCCATTTGTTAACATCAATTTTAATTCAAATGCACTGTTTAGTTGGTCCCTGTTTGTATACATTTTTCTTTCAAGTAAAAAAAAAGTGTGA 489 0.4908 MEEVVEDKEVKVRRMKEAHRSGKLVFCCGEVQQYTLEMLMRASAELLGRGSVGTAYKRVLDSRLILTVKRLDGGKSGESDGVVFQRHMEAVGRLRHPNLVPLRAYFQAKVERLVIYDYQPNDSIFNLVDGSHYPFVNINFNSNALFSWSLFVYIFLSSKKKV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0206 162 Pfam Protein kinase domain 44 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0206 162 SUPERFAMILY Protein kinase-like (PK-like) 45 156 IPR011009 -
Vra9g0206 162 PANTHER LRR RECEPTOR-LIKE KINASE 4 132 - -
Vra9g0206 162 ProSiteProfiles Protein kinase domain profile. 41 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0206 162 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 132 - -
Vra9g0206 162 Gene3D Phosphorylase Kinase; domain 1 5 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0206 Vra-Chr9 1453164 1453900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0206 9 131 Receptor kinase-like Gene Family AT5G43020 61.789 1.03e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vra9g0206 Pkinase 7.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0206 - - vra:111242531 313.538