Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0204 ATGATGAACATTGCTCTTCTTGTTCAACTCTTTGCATTTTCCTTCCTTAGTTGTCTGTATGCACAAGACACCACCACCCTTGTGCCTGCCATCTTTACATTTGGTGATTCTGCTGTGGATGTAGGAAATAATGACTATCTTCCCACGATTTATAAGGCTAATTACCCTCCCTATGGGAGAGACTTTGTTAACCACCAACCAACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATCACTGCTGATACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCGTCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCTGCTGCATCTGGTTATGATGAAAATGCTGCTATTTTGAATCATGCAATTCCATTGTCCCAACAGTTAAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTCAAAAGGCAGCCTCAATTATCAAAGATGCATTGTACGTGCTCAGTGCTGGCAGCAGCGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGTATACACACCTGACCAGTATGGCTCCTTCTTAGTTGGTTCTTTCTCCAGTTTTGTTAAGGACTTGTATAGATTGGGAGCCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACTCTGATGCCCAAGCGTTTAACAAGAAGATCAACTCAGCTGTAGCAAATCTTCAAAAGCAACTTCCGGGTCTCAAGATTGCTGTTTTTGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGTGGAGGCGAATAGAGGTTGCTGTGGTACCGGGACTGTGGAGACAACATCCTTGTTGTGTAATCCAAAATCACCTGGAACTTGTTCTAATGCCACCCAATATGTGTTTTGGGATAGTGTCCATCCTTCACAAGCAGCTAACCAAGTTCTAGCTGATTCATTAATTATCCAAGGCATAAGTCTTATCACATAA 1062 0.4275 MMNIALLVQLFAFSFLSCLYAQDTTTLVPAIFTFGDSAVDVGNNDYLPTIYKANYPPYGRDFVNHQPTGRFCNGKLATDITADTLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAAILNHAIPLSQQLSYFKEYQGKLAKVAGSQKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYGSFLVGSFSSFVKDLYRLGARRLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQAFNKKINSAVANLQKQLPGLKIAVFDIYKPLYDLVQSPSKFGFVEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADSLIIQGISLIT* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0204 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 352 - -
Vra9g0204 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Vra9g0204 353 PANTHER GDSL ESTERASE/LIPASE EXL3 5 352 - -
Vra9g0204 353 SUPERFAMILY SGNH hydrolase 31 344 - -
Vra9g0204 353 Gene3D SGNH hydrolase 21 348 IPR036514 -
Vra9g0204 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0204 Vra-Chr9 1425925 1427717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0204 27 344 Acyl Lipid Metabolism Gene Families AT4G10950 32.188 3.49e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0204 - - vun:114167332 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0204 9 1425925 1427717 Vra9g0204 9 1425925 1427717 ECH
Vra5g2492 5 31878441 31880184 Vra9g0204 9 1425925 1427717 PCT