Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0172 ATGGCTGCCCTTTTGAGTGTGCTCTGTGTTGTGTTGGCTGTGATGAATAGCTCAGCCAAAATAGCAGCTAGGGAATTCAAAGTGGGTGGCGAAATGGGTTGGCATGAACCTTCCCCCAACGACACTGCATTTTATAATCAATGGGCTTCAACCAACAGGTTTCAAGTTGNTGATTCTTTGGTTTTTGAGTACCAGAATGACTCAGTTATGAATGTGGAGAGATGGGAATACTTCCACTGTGACTCAAACAACCCCATCAGTGCATTTGATGATGGCAACAGCACAGTGATTCTTGGTAGCCCTGGGATGTTCTACTTCATCAGTGGAACTGAAGATCAATGCCAGAAAGGGGAGAAATTGATGGTAGAAGTCATGTCATTGCGCTCAGTTCCGTCACCATTGCCTCAAGGGTTTCTGACTTCAGTTTTTTCTTCTATTTTCTTCTTCTGCTAA 453 0.4393 MAALLSVLCVVLAVMNSSAKIAAREFKVGGEMGWHEPSPNDTAFYNQWASTNRFQVXDSLVFEYQNDSVMNVERWEYFHCDSNNPISAFDDGNSTVILGSPGMFYFISGTEDQCQKGEKLMVEVMSLRSVPSPLPQGFLTSVFSSIFFFC* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0172 150 PANTHER BLUE COPPER PROTEIN 8 128 IPR039391 GO:0009055
Vra9g0172 150 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Vra9g0172 150 Pfam Plastocyanin-like domain 41 117 IPR003245 GO:0009055
Vra9g0172 150 Gene3D - 22 129 IPR008972 -
Vra9g0172 150 PANTHER EARLY NODULIN-LIKE PROTEIN 2 8 128 - -
Vra9g0172 150 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Vra9g0172 150 CDD OsENODL1_like 24 125 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0172 Vra-Chr9 1168660 1169206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0172 4 128 Phytocyanin Superfamily AT1G79800 50.400 8.13e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0172 - - vra:106773065 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0172 9 1168660 1169206 Vra9g0172 9 1168660 1169206 ECH