Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0145 ATGAACAGACAGGGCCAGAGATCCGGTGCGACGGGGGTGCACCATAACCGCCAGCACTCCGAACACTATCTTGATGCTTCTTCCAAGTGGTTCAACTCCTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATCTGTACGGTGGCGGTGGCAGAATGTACCGGAACAGTGTGCAGAAGAGCTTCAGTGAGTATTCTATGGATCCGTTAACGCCTCCTCGTAGTTATGCCGTTAAGAAAAACGGTGATGAGGACGATTCTCCTCGCGATTTCAGCCCTGGCCTCTTGGATATCCATTCCTTCGATACAGAGCTTCTTCCTCAGATTCCGTCCTCGAACGCGTATGAGTCCGAGCCTTACATTTTCGGCAAACAAACTGGCAGAGCTCGTCCTACTGATAACAACGTCTACAATAGTCTTGCCGCCGCAGAGAATCTGAAGTCTAGCAATGTAGCTAAGATTAAAGTCGTGGTTCGCAAGAGACCGCTAAATAAGAAGGAGACAGCTAAGCATGAGGAGGATATTATAGACACAGTTTCAAATTCTTTAACCGTGCACGAGACCAAACTTAAGGTTGATTTAACTCAGTATGTTGAGAAGCATGAGTTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGACGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCAACTTGCTTTGCGTATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCCAGAGACATCTTGAGATTGATGCATCATACGTACAGGAGTCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGACCGAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCAAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAACGAGGAGTCTTCACGGTCACATGCAATTCTTCAGCTTGCTATCAAGAGATCAGTTGATGGGAATGTATCCAAGCCTCCCCGTGTTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTCGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGCAAATTGACTGAAGTTCTGAGGGATTCGTTTGTTGGTGATTCCCGCACTGTTATGATATCTTGCATATCACCAAGTTCCGGTTCATGTGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCCAAAGGGAACAATTCTAAGAAGGACGTTTTATCTTCAAATTTCAACCTTAAAGATTCAATTACTATTCCCTTGTCCTCTGTTAATACATATGCCTATGAGGATCGCACAACTGATACATGGCCTGAAGAAAAAGACGGGGATGAATTTAGTCCTCCTGAAGATTACTATGAACAGGTGAAACCATCATGGAAGAAAAATGGAAAGATAGAACCATATGGTGTAACAGATGACAAATTTAAGAAACCCCCCAATGGCCAGATTAAATGGAAGGACATTCCAAAAGTTGAACCTAAAACAGTACAGTCTGATGATGATTTGAATGCCCTCTTACAGGAAGAAGAAGACCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGACAAACCAGGTAATCAGCTGGATGATTATATAGCAAAACTAAATGCCATTCTGTCTCAGAAGGCAGCTGGCATCATGCAGTTACAAACCCGTTTAACTCATTTCCAGAAACGTTTAAAGGAGCATAGCGTTCTGGCTTCATCTGCTGGCTACTAA 2010 0.4303 MNRQGQRSGATGVHHNRQHSEHYLDASSKWFNSSSNHIPPLQDYNLYGGGGRMYRNSVQKSFSEYSMDPLTPPRSYAVKKNGDEDDSPRDFSPGLLDIHSFDTELLPQIPSSNAYESEPYIFGKQTGRARPTDNNVYNSLAAAENLKSSNVAKIKVVVRKRPLNKKETAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRSQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKDSITIPLSSVNTYAYEDRTTDTWPEEKDGDEFSPPEDYYEQVKPSWKKNGKIEPYGVTDDKFKKPPNGQIKWKDIPKVEPKTVQSDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNAILSQKAAGIMQLQTRLTHFQKRLKEHSVLASSAGY* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0145 669 ProSitePatterns Kinesin motor domain signature. 375 386 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra9g0145 669 MobiDBLite consensus disorder prediction 515 534 - -
Vra9g0145 669 Gene3D Kinesin motor domain 132 479 IPR036961 -
Vra9g0145 669 Coils Coil 587 618 - -
Vra9g0145 669 Pfam Kinesin motor domain 159 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 SMART kinesin_4 151 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 CDD KISc_KIF2_like 153 474 - -
Vra9g0145 669 ProSiteProfiles Kinesin motor domain profile. 153 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 MobiDBLite consensus disorder prediction 66 92 - -
Vra9g0145 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 476 IPR027417 -
Vra9g0145 669 MobiDBLite consensus disorder prediction 1 21 - -
Vra9g0145 669 PANTHER KINESIN-RELATED PROTEIN 6 1 669 - -
Vra9g0145 669 PRINTS Kinesin heavy chain signature 233 254 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 PRINTS Kinesin heavy chain signature 376 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra9g0145 669 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 669 - -
Vra9g0145 669 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0145 Vra-Chr9 961624 967277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0145 152 476 Calmodulin-binding Proteins AT5G65930 33.731 2.71e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0145 K10393 - gmx:100802651 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0145 9 961624 967277 Vra9g0145 9 961624 967277 ECH