Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0137 ATGTCAAAGAAAATCTCAAAATCCCTGAGAGATTATCTCATCAAAATCAAACCCTCGCAACGTTCCATGGTTAAATTATCCTCTAAGAAATGGGTTCCCAAAGGTTGCAAGCATCCTAGGACTTCTTCTATCGACATGGACACCAACAAAAACATCATCAAAAAAACCACCACCAACGTCAAAGACGACGAAGCCATGTTAGCAGACATTGATCGCTTTCTCATCGAGAATTTCAAGAACCTCTTCCTCGGTGAAGAAACCACCACCAACAATGAATCCAAAGAACAAAAATCTCCCAAACTAGACTTTATCAGATTTGACTCTTCTCCAAGGTTTGATGATTCCCCACTGAACCTCTTCACTGACACAACAACCGAACCAGGACGATCCAGTTTGACCATGTCTGACCCTGAGGGTGTGGAGGAACAAACCACCGTTCTGAGTAATTGCGTGGTGGTTTTGGCCAACTCCGCCAGACCCACCGAGGATTTCCGTCGGTCCATGGAGGGCATGGTTGAAGCAAGATTGAAGAAGAGTGAAAAGGTGGATTGGGAGTTCATGCAGGAGCTTTTGTTCTGTCACATGAATCTCAACCAGAAGAAGTGGCACAAGTTCATTCTCAGCGCCTTCGTGGATATCGCCACCAGCCTCCGCCAGACACCGGAGATTTCTCCGGCGAACCCCCAGCCGCCGCGGAGCGTTCGGACTGTAAGGATCGGAAGAGAAGTGAGGAAGAAGACAAAGGAAGCAATCACCTTGGAATTTGGGTCACCCTAA 777 0.4723 MSKKISKSLRDYLIKIKPSQRSMVKLSSKKWVPKGCKHPRTSSIDMDTNKNIIKKTTTNVKDDEAMLADIDRFLIENFKNLFLGEETTTNNESKEQKSPKLDFIRFDSSPRFDDSPLNLFTDTTTEPGRSSLTMSDPEGVEEQTTVLSNCVVVLANSARPTEDFRRSMEGMVEARLKKSEKVDWEFMQELLFCHMNLNQKKWHKFILSAFVDIATSLRQTPEISPANPQPPRSVRTVRIGREVRKKTKEAITLEFGSP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0137 258 MobiDBLite consensus disorder prediction 117 136 - -
Vra9g0137 258 Pfam Transcriptional repressor, ovate 157 217 IPR006458 -
Vra9g0137 258 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 238 - -
Vra9g0137 258 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 151 218 IPR006458 -
Vra9g0137 258 ProSiteProfiles OVATE domain profile. 153 216 IPR006458 -
Vra9g0137 258 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 238 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0137 Vra-Chr9 912237 913210 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra9g0137 Ovate 7.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0137 - - var:108320446 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0137 9 912237 913210 Vra9g0137 9 912237 913210 ECH
Vra5g2434 5 31436530 31437821 Vra9g0137 9 912237 913210 PCT