Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0133 ATGGGTGTAAACTTTAACAGAGTCGAGGACTTAGCATGCAACAATGGCTGCAGCATGAAGATCCAAAGTGATACAGAAATGGCAATGCCAGTGCCAGCCATGGAAATCCATAAGGTTCAGTTGCCACCAGAACGAACCACCTTGCAAAAACTTAGACATAGACTCTCTGAGATATTCTTCCCAGATGATCCTCTTCACAGGTTCAAGAACCAAACTTGCTTCATGAAACTTCTCCTTGCTCTCCAATACATCTTCCCCATTTTCCAATGGGCCCCTCTCTACAACCTTTCCCTTCTCCGCTCTGACATCATCTCGGGTCTCACCATTGCAAGCCTCGCCATTCCTCAGGGTATCAGCTATGCTAAGCTAGCAAACTTGCCACCCATTCTTGGATTATATTCCAGCTTTGTGCCTCCATTGATATATTCCCTGCTTGGGAGTTCTAGACATCTGGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAACTGAGACGATTTCTTATACTCAAGATCCTATTCTCTATCTCAAAATGGCTTTCACTGCCACTTTTTTTGCTGGTTTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTGATTGACTTTCTCTCAAAGGCAACTCTGGTAGGTTTCATGGCTGGTGCAGCCATTATTGTGTCACTACAGCAGCTGAAAGGGTTGCTTGGAATAGTCCATTTCACCAACAAGATGCAAATAACGCCTGTGCTTATCTCTGTTTTCAAGCAAAGAGAAGAGTGGTCATGGCAAAACCTTCTGCTGGGATTCAGTTTCTTGCTATTCCTGTTGACAACAAGGCACATTAGCTTGAGGAAGCCAAAATTATTCTGGGTTTCAGCAGCTGCCCCGTTGATATCAGTCATTCTGTCAACCATTTTAGTATTTTTTCTCAGAAATAAGACCCATAAAATTGCAATTATCGGTGAATTACCAAAAGGACTGAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTCTCAAAACAGGACTTGTCACTGGGATTTTGTCTCTCACTGAAGGAATTGCAGTGGGAAGAACATTCGCTGCACTAAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGTTCTTGTTCTTCATGCTATGTCACATCAGGGTCATTTTCTCGATCAGCTGTTAACTTCAATGCTGGGGCACAGACAGCAGTATCAAATATAATCATGGCATCGGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCGCTGTTCTATTACACACCGAATGTAGTCTTAGGAGCCATTATAATCACTGCTGTTGTAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGACTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTGTTCATTTCAGTGCCTCTTGGCCTTGGAATAGCGGTGGGAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCGGGGACGCCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGAGGATTCCTTCATTTATCATTTTGGCAGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTGCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACAATGAAAGTACATTGAAGTGTATAATTTTGGACATGACGGCTGTTACAGCCATAGACACAAGTGGAACCGATACTCTATGTGAACTTAGGAAGGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGGAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGCTGTCTATCTCACTGTTGGAGAAGCTGTGGCTGACATTTCATCTTCATGGAAAGCTCAGCCTTGA 1986 0.4265 MGVNFNRVEDLACNNGCSMKIQSDTEMAMPVPAMEIHKVQLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCFMKLLLALQYIFPIFQWAPLYNLSLLRSDIISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLTETISYTQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQREEWSWQNLLLGFSFLLFLLTTRHISLRKPKLFWVSAAAPLISVILSTILVFFLRNKTHKIAIIGELPKGLNPPSSNMLYFNGPYLALALKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTSGSFSRSAVNFNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLGAIIITAVVGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVGISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGTDTLCELRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKAVYLTVGEAVADISSSWKAQP* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0133 661 Pfam STAS domain 531 649 IPR002645 -
Vra9g0133 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Vra9g0133 661 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 661 - -
Vra9g0133 661 SUPERFAMILY SpoIIaa-like 535 652 IPR036513 -
Vra9g0133 661 TIGRFAM sulP: sulfate permease 86 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra9g0133 661 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Vra9g0133 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Vra9g0133 661 Pfam Sulfate permease family 99 478 IPR011547 GO:0016021
Vra9g0133 661 Gene3D STAS domain 510 655 IPR036513 -
Vra9g0133 661 PANTHER SULFATE TRANSPORTER 24 661 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0133 Vra-Chr9 887019 890955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0133 1 661 Inorganic Solute Cotransporters AT3G15990 73.494 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0133 K17471 - gmx:100817604 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0133 9 887019 890955 Vra9g0133 9 887019 890955 ECH
Vra5g2428 5 31395505 31400075 Vra9g0133 9 887019 890955 PCT