Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0125 ATGAAGAAGGAAAGCAGTGTTACACTGAAAACTGGGGAGCTATCTGGTCGAGTGACAAGGGCTCGGGCAGCTGCTCATTGCTCATCAGGAAAGCTACCCCCTTTGAAAGAGAGATCACAGCAAAATCAGAAGCAGTTATCCAGAGTCAACTCAAAAAGAGCAGCTTCTGATAATACATGTGTTCCTCGTAAAAAAAGGACCGTTCTTCAGGATGTTACTAATGTTTGCTGTGAAAATGCGTACACGAGTTGTGTCAACTCAAATAAAATTCAGGCTAAGAAAAGAAAGCTGTCTAAGGCTGCTCAAGTTAATGTGTCCAAAGTGGTTCCTTCTGTTGCTGTAGACTCAATGCAATTTCAAGCTGACTCCAAAGCAAAAAGTTTACAGGAAACGGCATTGAAATCAGAAGATACTATGTGCTCAATTAATTTGGAACACAAAGAACTTCTGCGGCCAAGTTCCAATGAGTGTAACATGGATGTTCGATTGCCTGAAAGTCAGATGTCTGGAATATCTGGTCAACCTTTGATTTCTCAGAATAAAGACAAGAAAGGTAACCTTTCGACAGTTTTAACTGCGTTGAAGGATCAAGGCGTCACTGGCATAGACGATGATCTTGAAGATCCTCTATTGTGCAGCCTCTATGCTGCTGATATCTACGACACCATGCGTGTTGCTGAGCTTGCAAGAAGGCCTTATTCTAATTTTATGGAGATGGTGCAGCGAGACATCACTCAAAGCATGCGTGGAATACTGGTTGATTGGCTTGTAGAGGTTTCGGAGGAATACAAATTGGTTACAGACACTCTTTACCTCACTGTGTACCTCATAGATTGGTTCCTCTCCAAAAACTACATTGAAAGACAGAGACTTCAGCTACTTGGTATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAACGCCCCGCGTATTGAAGATTTCTGCTTCATTACAGACAATACATACACCAAAGCTGAGGTGCTGAAAATGGAGAGTCAAGTGTTGAAGTCGTCTGAATATCAACTGTTTGCTCCCACTATAAAAACATTTCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCATACAAGGATCCAAGCCTTGAATTAGAGTACCTGGCCAATTACCTAGCTGAACTAACACTCATGGACTATGGTTTCTTGAATTTCCTTCCTTCTATCATTGCTGCATCAGCAGTGTTTCTTGCCCGGTGGACACTGGATCAGTCAAACCATCCATGGAATCCAACTCTTCAACACTATGCCAGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTGCAAGACCTGCAGCTGAATACTGATGGTTGCCCTCTAACTGCCATTCGCACAAAATATAGACAAGACAAGTTCAAGTGTGTAGCAGCTCTGTCTTCACCAAAACTTCTTGAAACTTTGTTCTGA 1434 0.4233 MKKESSVTLKTGELSGRVTRARAAAHCSSGKLPPLKERSQQNQKQLSRVNSKRAASDNTCVPRKKRTVLQDVTNVCCENAYTSCVNSNKIQAKKRKLSKAAQVNVSKVVPSVAVDSMQFQADSKAKSLQETALKSEDTMCSINLEHKELLRPSSNECNMDVRLPESQMSGISGQPLISQNKDKKGNLSTVLTALKDQGVTGIDDDLEDPLLCSLYAADIYDTMRVAELARRPYSNFMEMVQRDITQSMRGILVDWLVEVSEEYKLVTDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMESQVLKSSEYQLFAPTIKTFLRRFLRAAQASYKDPSLELEYLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLQHYASYKASDLKTTVLALQDLQLNTDGCPLTAIRTKYRQDKFKCVAALSSPKLLETLF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0125 477 CDD CYCLIN 248 337 IPR013763 -
Vra9g0125 477 PIRSF Cyclin_A_B_D_E 24 476 IPR039361 -
Vra9g0125 477 PANTHER CYCLINS 45 477 IPR039361 -
Vra9g0125 477 PANTHER CYCLIN-A2-4 45 477 - -
Vra9g0125 477 SUPERFAMILY Cyclin-like 207 343 IPR036915 -
Vra9g0125 477 Pfam Cyclin, C-terminal domain 347 469 IPR004367 -
Vra9g0125 477 MobiDBLite consensus disorder prediction 34 57 - -
Vra9g0125 477 Gene3D - 232 345 - -
Vra9g0125 477 Pfam Cyclin, N-terminal domain 218 343 IPR006671 -
Vra9g0125 477 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Vra9g0125 477 SMART Cyclin_C_2 347 470 IPR004367 -
Vra9g0125 477 MobiDBLite consensus disorder prediction 1 59 - -
Vra9g0125 477 CDD CYCLIN 347 437 IPR013763 -
Vra9g0125 477 Gene3D - 218 466 - -
Vra9g0125 477 SMART cyclin_7 254 338 IPR013763 -
Vra9g0125 477 SMART cyclin_7 351 439 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0125 Vra-Chr9 800964 806879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0125 1 477 Core Cell Cycle Gene Families AT1G80370 55.943 6.35e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0125 K06627 - gmx:100789757 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0125 9 800964 806879 Vra9g0125 9 800964 806879 ECH