Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0118 ATGTCAACCACTACCACCCCTCTCCTCCGCCACAACCGGTGGCTCCCCTCCTCCATCAAACTGAAGACAACCCTTTTCTCAGAGCTCTCCGGCGCGGTGGGTGACCTAGGGACTTACATACCCATCGTGCTCGCTCTATCTCTGGTAAACAACTTGAATCTCACTACCACACTCGTCTTCACTTCGCTCTATAACATCGCCACCGGCTTGCTCTTCGGCCTCCCCATGCCGGTCCAGCCCATGAAGTCCATCGCCGCCGTTGCCATCTCCGCCTCGCCGCCGCTCACCATCGCCCAGATCTCTGCCGCCGGTCTCTCCGTCGCCGCCGTCCTCCTCGTCCTCGGAGCCACCGGTCTCATGTCTGTCCTCTACCGCTACCTCCCCCTCCCCGTCGTCCGCGGAGTCCAACTCTCCCAGGGCCTCACCTTCGCCTTCTCCGCCGTCAAATACATTCGCTACGACCAAGACCTCGCCAAATCAAAATCCGGCCCTGCGCGCCCCTGGTTCGCCCTCGACGGCGTTGCCATCGCCCTCGCAGCCGTCCTCTTCCTCGTCCTCACCACCGGCGCCGGAGACGATCCACCACCGCCACAACAACAAGAAGAAGAAGAAAATGAAAACAGAGTCAGGGTTCACCGGAGGTTGCGGGTTTTGTCAACTATCCCTGCGGCGTTGATAGTGTTTCTGTTTGGTCTGGTGTTGGGTTTCGTTCGCGACCCTTCCATTTTCGGAGATCTTAAGTTTGGGCCTTCGAAGATTTCCGTGGTTAAGATTACCTGGGAAGATTTTAAAGTTGGATTCGTCAGCGCCGCAATTCCACAGATTCCGTTATCCGTTCTGAATTCAGTTATTGCAGTTTGCAAGCTCTCTGGGGATTTGTTTCCCGAACGTGAAGCTTCGGCGATGCATGTTTCAGTGAGTGTGGGACTTATGAATTTCGTGGGGTGTTGGTTCGGAGCCATGCCCTGTTGCCACGGAGCCGGAGGTTTGGCGGGACAGTACAGGTTCGGAGGTAGGAGCGGTGCTTCGGTGGTTTTCCTGGGGATTGCAAAGCTTGTGCTTGCTCTGGTGTTCGGAAACTCCCTCGGAAGAATCTTGAACGAGTTTCCGATTGGGATTCTTGGAGTGCTTTTGTTGTTTGCAGGGATTGAGTTAGCCATGGCTGCTAGAGACATGAACACTAAACAAGAATCTTTCGTTATGCTTGTTTGTGCTGCTGTTTCACTCACTGGTTCAAGTGCTGCTTTGGGATTTTTTGTCGGCATTGTGCTTTACTTACTTCTCAAATTAAGGGAGCTTGAATGTGGAGGTTTTCCTTTTGGATTTTGCTCATCCAAGACCACCAAGTCTGAAGAACATGCAAGTTTAATTGCCTAG 1377 0.5367 MSTTTTPLLRHNRWLPSSIKLKTTLFSELSGAVGDLGTYIPIVLALSLVNNLNLTTTLVFTSLYNIATGLLFGLPMPVQPMKSIAAVAISASPPLTIAQISAAGLSVAAVLLVLGATGLMSVLYRYLPLPVVRGVQLSQGLTFAFSAVKYIRYDQDLAKSKSGPARPWFALDGVAIALAAVLFLVLTTGAGDDPPPPQQQEEEENENRVRVHRRLRVLSTIPAALIVFLFGLVLGFVRDPSIFGDLKFGPSKISVVKITWEDFKVGFVSAAIPQIPLSVLNSVIAVCKLSGDLFPEREASAMHVSVSVGLMNFVGCWFGAMPCCHGAGGLAGQYRFGGRSGASVVFLGIAKLVLALVFGNSLGRILNEFPIGILGVLLLFAGIELAMAARDMNTKQESFVMLVCAAVSLTGSSAALGFFVGIVLYLLLKLRELECGGFPFGFCSSKTTKSEEHASLIA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0118 458 PANTHER MOLYBDATE TRANSPORTER 2 3 452 - -
Vra9g0118 458 Pfam Molybdate transporter of MFS superfamily 267 385 IPR031563 GO:0015098|GO:0015689
Vra9g0118 458 Pfam Molybdate transporter of MFS superfamily 28 142 IPR031563 GO:0015098|GO:0015689
Vra9g0118 458 PANTHER - 3 452 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0118 Vra-Chr9 734957 736808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0118 1 455 Inorganic Solute Cotransporters AT1G80310 65.293 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0118 - - vra:106772876 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0118 9 734957 736808 Vra9g0118 9 734957 736808 ECH