Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0067 ATGGATTCAAATTCAAAGAAATGTAACAAGATCCGTGAGGTGGTTAGGCTTCAACAGATCCTCAAGAAGTGGAAGAAAGCTGCAACATCTTCCTCTGCTTCCAACAGTGCAGACATGGTTCCAAAAGGCTTCCTCGCTGTCTGTGTTGGAACAGAGCTCAAGAGATTCATCATTCCCACCCATTACCTGAGACACCAAGCTTTTGAGATTTTGCTCCAAGAAGCCCAAGATGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCATGTATCAGTCTTCCAGAAAATACTCAAGACCGTGGAGGACGACAACAACAACAAACAACCCTTGCTGCATCACTCTGGCTTCCAATGA 363 0.4518 MDSNSKKCNKIREVVRLQQILKKWKKAATSSSASNSADMVPKGFLAVCVGTELKRFIIPTHYLRHQAFEILLQEAQDEFGFQQEGVLKIPCHVSVFQKILKTVEDDNNNKQPLLHHSGFQ* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0067 120 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Vra9g0067 120 PANTHER OS02G0143400 PROTEIN 8 110 - -
Vra9g0067 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0067 Vra-Chr9 422156 422518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0067 5 109 Calmodulin-binding Proteins AT2G24400 49.618 1.43e-39 129