Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0048 ATGGAACTGTTGCAAAGGAAAAATGTAATGTTTAAGAATGCTAAATTCAAAAGTTCGCCGCAGTTGGGAGCATTTTGGATAAGAGAGATGATCATCAACGTGAAGGAATCGACGATGGTGCGGCCGGCGGAAGAGGGGGAGCGGCGGGTGGTGTGGAACTCGAACGTGGACCTGGTGGTGCCGAATTTCCACACGCCAAGCGTCTACTTCTACAGAGCGAACGGCGCGTCCAACTTTTTCGAGGGGAAGGTTCTGAAGGAGGCACTGAGCAAGGTGCTGGTGCCCTTCTACCCAATGGCTGGGAGGCTCCGCCGAGACGAAGACGGTCGCGTGGAGATTGACTGCGACGGTCAGGGGGTTCTCTTCGTGGAGGCCGACACCGGCGCAGTCATCGACGACTTCGGGGACTTTGCACCGACCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCGCAAGGGATCGAAACCTATCCCCTGTTGGTGTTACAGGTAACACACTTCAAATGTGGAGGGGCATCACTAGGAGTTGGTATGCAGCATCATGCCGCAGATGGAGCCTCTGGTCTTCATTTCATCAATACATGGTCTGATGTGGCTCGTGGCTTGGATGTTTCAATTCCACCATTCATTGATAGAACAATACTTCGTGCGAGAGATCCACCTCGACCAGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAAACTCAACCAGGCACAGAATCTGATACTGCAGCTGTCTCTATTTTCAAACTCACACGAGACCAGCTCTCCACCCTTAAAGCCAAGTCCAAAGAAGATGGCAACACAATCAACTACAGCTCTTATGAGATGTTAGCTGGACACGTGTGGAGAAGTGTCTGCAAAGCAAGAGCACTTCCTGAAGATCAAGAGACCAAATTGTACATTGCAACTGACGGAAGATCAAGGCTTCAACCTTCTCCTCCACCAGGTTACTTTGGCAATGTCATATTCACAACCACACCCATAGCTCTGGCAGGTGATCTCATCTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAACGCATTACTACGAATGGACAACGAATATCTAAGATCCGCTCTTGACTATCTAGAGCTGCAACCTGATCTCAAAGCTCTGGTTCGTGGTGCACACACTTTCAAATGTCCAAATCTTGGCATCACCAGCTGGACTAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGTCCTGGTGGAATTGCATTCGAGGGTTTATCTTTCATAATCCCAAACTCCACCAACGATGGTAGCTTATCTGTCGCAATATCTCTTCAGCCCGACCATATGAAGCTGTTTAAGGAATACTTTTATGACATTTGA 1380 0.4928 MELLQRKNVMFKNAKFKSSPQLGAFWIREMIINVKESTMVRPAEEGERRVVWNSNVDLVVPNFHTPSVYFYRANGASNFFEGKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPAVDYSQGIETYPLLVLQVTHFKCGGASLGVGMQHHAADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTQPGTESDTAAVSIFKLTRDQLSTLKAKSKEDGNTINYSSYEMLAGHVWRSVCKARALPEDQETKLYIATDGRSRLQPSPPPGYFGNVIFTTTPIALAGDLISKPTWYAASRIHNALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAFEGLSFIIPNSTNDGSLSVAISLQPDHMKLFKEYFYDI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0048 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 33 458 - -
Vra9g0048 459 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 33 458 - -
Vra9g0048 459 Pfam Transferase family 32 458 - -
Vra9g0048 459 Gene3D - 26 234 IPR023213 -
Vra9g0048 459 Gene3D - 241 459 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0048 Vra-Chr9 324021 326366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0048 30 459 Monolignol Biosynthesis Gene Families AT5G48930 76.552 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0048 K13065 - gmx:100820075 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0048 9 324021 326366 Vra9g0048 9 324021 326366 ECH
Vra5g1926 5 25052871 25054747 Vra9g0048 9 324021 326366 PCT