Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0045 ATGAAAGGCTCATGGAAACTCCGATGTGCCCTCTTGCTACTCATCTCCGCCGTAGCCACCGCCACCGACCACATTGTCGGTGCCAATCGTGGGTGGAACCCTGGCCTCAACTACACTCTCTGGGCTAACAACCACACTTTCTACGTCGGCGACCTTATCTCATTCAGGTACCAGAAAAACCAATACAATGTGTTCGAGGTGAACCAAACTGGGTATGACAACTGCACCACTGAAGGGGCGGTCGGAAATTGGAGCAGTGGAAAGGATTTCATACCCCTGAATAAGGCCAAGAGATATTACTTCATCTGTGGAAATGGCCAATGCTTCAGTGGAATGAAGGTGTCTGTTATTGTGCACCCTCTTCCTCCACCTCCCACCTCTGCAATTTCTGCTGAACATTCAACGTCACACTCTGCTTCTCCTCTGCTTTTCAAACGCTCTCTGTTGCTGTCTTCTCTTTTCGCTTGCTTTGGATTTCTCTTGATGTAG 489 0.4908 MKGSWKLRCALLLLISAVATATDHIVGANRGWNPGLNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVIVHPLPPPPTSAISAEHSTSHSASPLLFKRSLLLSSLFACFGFLLM* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0045 162 PANTHER OS09G0557900 PROTEIN 11 145 - -
Vra9g0045 162 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Vra9g0045 162 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Vra9g0045 162 CDD Phytocyanin_like_1 22 118 - -
Vra9g0045 162 PANTHER BLUE COPPER PROTEIN 11 145 IPR039391 GO:0009055
Vra9g0045 162 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Vra9g0045 162 Gene3D - 20 121 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0045 Vra-Chr9 311333 312421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0045 19 128 Phytocyanin Superfamily AT5G15350 46.429 2.46e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0045 - - pvu:PHAVU_010G162400g 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0045 9 311333 312421 Vra9g0045 9 311333 312421 ECH