Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0039 ATGTCTCTAAAGATAGCAGCAGAAGTTTATCCAAAATCACCATCAGAGACAGTGATGGAGCCATTGATTGTGGTAAACGAATATGATGAAGATAAACACAAGGTGGCAGTAGAGAAACTCGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAGTTGCATGTCATGCTGGTTGCAGAATATGGAGAAGGAGGAGAAGTTGTTGGGGTGATAAGGGGTTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAAAACTGGCCTATATCTTGGGGCTCAGAGTCTCCCCTCGACACAGGAGATTTGGCATTGGCACAAAACTAGTCGAACATTTAGAAGAATGGTGCAAGCAAAAAGGGGCTAAGTATGCATATATGGCAACTGATTGTACCAATGAGCCTTCAGTGAATCTGTTCACAAAAAAATGTGGCTACTCAAAGTTCAGGACTCTAACCATACTGGTGCAACCTGTGCATGCTCACTACAAACCAATCAGCTCCAATGTTGCCGTGCTTCGCCTTCCACCACGCCTTGCAGGCTCCATGTACGACCAGTTGTTTGCCAATTCAGAATTTTACCCTAAAGACAAAGACTCGATCTTGTGCAACAAGCTGAATCTGGGGACTTTCATGGCCATCCCCAAGAAGTACCTGTCCAAGTGTGATCCAAAAAGGGGCATTCTTCCTCCAAGCTATGCCATACTGAGCGTGTGGAACACCAAAGATGTGTTCAAACTGCAAGTAAAGGGTGTGTCACCATTGGCACATGCCTGCTGCGTAGGTACGAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCGTTTCCAGATGTTTTCAGGCCATTTGGGGTTTATCTTTTGTATGGACTGCACATGGAAGGAAAGTGTGGTGCTCAACTGATGAAGTGCTTATGTGCATTTGTGCATAACATGGGAAGAGATGGTGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTCAGAGACGTAGTCCCACATTGGAGAAAATTCTCATGGGCAGAGGACATGTGGTGTATAAAGAATCTTCACAAGGGTTCATCTCAAAATTGTGATTGGTTCACTTCTAGATCCTCTTCGCCAGTTATATTTGTTGATCCTCGAGACTTTTGA 1206 0.4561 MSLKIAAEVYPKSPSETVMEPLIVVNEYDEDKHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEGGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPRHRRFGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYDQLFANSEFYPKDKDSILCNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYLLYGLHMEGKCGAQLMKCLCAFVHNMGRDGGGCGAIVAELGQRDPVRDVVPHWRKFSWAEDMWCIKNLHKGSSQNCDWFTSRSSSPVIFVDPRDF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0039 401 Gene3D - 26 169 - -
Vra9g0039 401 CDD NAT_SF 74 144 - -
Vra9g0039 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 170 IPR016181 -
Vra9g0039 401 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016407
Vra9g0039 401 PANTHER N-ACETYLTRANSFERASE 1 401 - -
Vra9g0039 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016407
Vra9g0039 401 PANTHER OS12G0561600 PROTEIN 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0039 Vra-Chr9 287097 289903 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra9g0039 Acetyltransf_1 2.6e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0039 - - gmx:100802670 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0039 9 287097 289903 Vra9g0039 9 287097 289903 ECH