Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0031 ATGCCAACTGACACGTCATCATTTTCCGGTGAAACCGTCTGCGTGACCGGCGCCGGCGGGTACATAGCTTCTTGGCTTGTGAAAGTTCTGTTAAAGGAAGGGTACACTGTGAGAGGAACCGTTCGAAACCCAGAGGATCCGAAGAATGGTCATTTGAAGAAGTTGGAAGGAGCGAAGGAAAGACTCACTCTGTATAAAGTTGATCTCTTTGATATTGATTCCATTAAAGCTGCTTTTCACGGTTGCCACGGCGTGTTCCACACCGCTTCTCCGGTCACCGACAACCCCGAAGAGATGGTGGAGCCGGCAGTGAATGGAACGAAGAATGTGATAACAGTAGCTGCAGAAGCAAAAGTGCGGCGGGTGGTGTTCACTTCGTCAATTGGCACGGTGTATATGAACCCTAACACGAGTAGGGATGTGGTGGTTGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAATTGGTACTGCTATGGGAAGACGGTGGCTGAACAATCAGCATGGGATATAGCTAAAGAAAGAGGGGTGGATTTGGTTGTGGTGAACCCAGTTGTGGTTATTGGTCCATTGCTTCAACCTACCATTAATGCTAGCACAATTCACATCCTGAAGTACCTTACTGGCTCTGCTAAGACCTATGTAAATGCCACACAGTCTTATGTACATGTTAAGGATGTGGCACTAGCCCATGTTCTTGTGTATGAGACTCCTTCAGCTTCTGGTCGATACATATGTGCCGAAAGTTCACTGCATCGTGGTGATCTCGTTGAAATTTTGGCCAAGTTTTTCCCAGAGTACCCAATTCCCACCAAATGTTCAGATGAAAAGAACCCGAGAGTAAAACCTTATATGTTTTCAAGCCAAAAGCTGAAAGATTTGGGAATGGAATTCACCCCAGTGAAGCAGAGTCTATATGACACAGTTAAAAATCTGCAAGACAATGGCCACCTTCCTGTGCTCCCAAAGCAGGAAAACTCCTATTGA 999 0.4605 MPTDTSSFSGETVCVTGAGGYIASWLVKVLLKEGYTVRGTVRNPEDPKNGHLKKLEGAKERLTLYKVDLFDIDSIKAAFHGCHGVFHTASPVTDNPEEMVEPAVNGTKNVITVAAEAKVRRVVFTSSIGTVYMNPNTSRDVVVDESFWSDLEYCKNTKNWYCYGKTVAEQSAWDIAKERGVDLVVVNPVVVIGPLLQPTINASTIHILKYLTGSAKTYVNATQSYVHVKDVALAHVLVYETPSASGRYICAESSLHRGDLVEILAKFFPEYPIPTKCSDEKNPRVKPYMFSSQKLKDLGMEFTPVKQSLYDTVKNLQDNGHLPVLPKQENSY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0031 332 Gene3D - 11 332 - -
Vra9g0031 332 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 325 - -
Vra9g0031 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Vra9g0031 332 CDD FR_SDR_e 13 299 - -
Vra9g0031 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 325 - -
Vra9g0031 332 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0031 Vra-Chr9 233555 235709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0031 10 276 Monolignol Biosynthesis Gene Families AT1G80820 73.034 8.37e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0031 K09753 - gmx:100811528 611.683